RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 FOSP01100 380 aaPredicted RBP9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 ADCY7P51828 1080 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 EXOSC10Q01780 885 aaKnown RBP9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 DRP2Q13474 957 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 UGCGQ16739 394 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 FAM160B1Q5W0V3 765 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 PPP1R18Q6NYC8 613 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 NIPA1Q7RTP0 329 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 TMC7Q7Z402 723 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 ZNF598Q86UK7 904 aaKnown RBP9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 MRPL43Q8N983 215 aaKnown RBP9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 HELQQ8TDG4 1101 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 LENG9Q96B70 501 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 ZNF558Q96NG5 402 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 ADAM7Q9H2U9 754 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 NGRNQ9NPE2 291 aaKnown RBP9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 BARHL2Q9NY43 387 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 TSR3Q9UJK0 312 aaKnown RBP9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 SORCS3Q9UPU3 1222 aa9.65□□□□□ -0.86
TGFBR3-208ENST00000529608 DCHS1Q96JQ0 3298 aa9.65□□□□□ -0.87
TGFBR3-208ENST00000529608 ZFHX2Q9C0A1 2572 aaPredicted RBP9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 PRR23AA6NEV1 266 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 MEIS3P2A8K0S8 358 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 B4GALT3O60512 393 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 CYP3A4P08684 503 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 EPCAMP16422 314 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 HOXB8P17481 243 aaPredicted RBP9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 ZNF76P36508 570 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 METAP2P50579 478 aaKnown RBP eCLIP9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 GPC3P51654 580 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 NEK4P51957 841 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 AP3B2Q13367 1082 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 RARS2Q5T160 578 aaKnown RBP9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 CWF19L1Q69YN2 538 aaKnown RBP9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 EFCAB12Q6NXP0 572 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 CLEC17AQ6ZS10 378 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 ZBTB33Q86T24 672 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 LRRC43Q8N309 656 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 RNF169Q8NCN4 708 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 GJA10Q969M2 543 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 ZNF577Q9BSK1 485 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 VN1R3Q9BXE9 311 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 SPG21Q9NZD8 308 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 GABBR1Q9UBS5 961 aa9.64□□□□□ -0.87
TGFBR3-208ENST00000529608 FSD2A1L4K1 749 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 TMEM150BA6NC51 233 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 PI15O43692 258 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 NPR3P17342 541 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 EIF4BP23588 611 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 ADD1P35611 737 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 NBL1P41271 181 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 BCAR1P56945 870 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 MTMR3Q13615 1198 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 SMC1AQ14683 1233 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 RTN1Q16799 776 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 SKOR2Q2VWA4 1001 aaPredicted RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 LONRF3Q496Y0 759 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 ODR4Q5SWX8 454 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 ZNF746Q6NUN9 644 aaPredicted RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 SLC22A17Q8WUG5 538 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 CASP10Q92851 521 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 KCNB2Q92953 911 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 LPPQ93052 612 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 SH2D3AQ9BRG2 576 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 ZBP1Q9H171 429 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 RBM28Q9NW13 759 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 PUF60Q9UHX1 559 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 AKT3Q9Y243 479 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 VPS13AQ96RL7 3174 aa9.63□□□□□ -0.87
TGFBR3-208ENST00000529608 A0A0U1RQF3 1178 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 GOLGA8AA7E2F4 631 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 GOLGA8BA8MQT2 603 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 ZBTB43O43298 467 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 STBD1O95210 358 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 CXCL14O95715 111 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 SRGAP2BP0DMP2 458 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 DARSP14868 501 aaKnown RBP9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 CPA1P15085 419 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 ZSCAN20P17040 1043 aaPredicted RBP9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 PPM1AP35813 382 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 KRT17Q04695 432 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 ITIH3Q06033 890 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 CUL4AQ13619 759 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 PFKFB3Q16875 520 aaPredicted RBP9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 KIAA1841Q6NSI8 718 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 FRMD5Q7Z6J6 570 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 UBALD2Q8IYN6 164 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 DNAJB4Q9UDY4 337 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 NR2E1Q9Y466 385 aa9.62□□□□□ -0.87
TGFBR3-208ENST00000529608 PCDHA10Q9Y5I2 948 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms