RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 SRGAP1Q7Z6B7 1085 aa16.22■□□□□ 0.19
PACS1-207ENST00000528935 THNSL1Q8IYQ7 743 aa16.22■□□□□ 0.19
PACS1-207ENST00000528935 LRRC43Q8N309 656 aa16.22■□□□□ 0.19
PACS1-207ENST00000528935 MTRQ99707 1265 aa16.22■□□□□ 0.19
PACS1-207ENST00000528935 BMP2KQ9NSY1 1161 aaPredicted RBP16.22■□□□□ 0.19
PACS1-207ENST00000528935 PIN4Q9Y237 131 aaKnown RBP16.22■□□□□ 0.19
PACS1-207ENST00000528935 GRXCR2A6NFK2 248 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
PACS1-207ENST00000528935 ATF7P17544 494 aaPredicted RBP16.21■□□□□ 0.19
PACS1-207ENST00000528935 IRS1P35568 1242 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 LTBRP36941 435 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.19
PACS1-207ENST00000528935 ZNF174Q15697 407 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 NOSTRINQ8IVI9 506 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 HELQQ8TDG4 1101 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 IGFLR1Q9H665 355 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 XPNPEP1Q9NQW7 623 aa16.21■□□□□ 0.19
PACS1-207ENST00000528935 POTEMA6NI47 508 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 ZNF623O75123 536 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 DGAT1O75907 488 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.18
PACS1-207ENST00000528935 TRAPPC10P48553 1259 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 RAB27AP51159 221 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 PLCB3Q01970 1234 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 ADAM15Q13444 863 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 MXD4Q14582 209 aaPredicted RBP16.2■□□□□ 0.18
PACS1-207ENST00000528935 TTC38Q5R3I4 469 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 PDE12Q6L8Q7 609 aaKnown RBP16.2■□□□□ 0.18
PACS1-207ENST00000528935 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 RNF149Q8NC42 400 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 RSPH1Q8WYR4 309 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 CCDC43Q96MW1 224 aaKnown RBP16.2■□□□□ 0.18
PACS1-207ENST00000528935 ZNF558Q96NG5 402 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 MRPL9Q9BYD2 267 aaKnown RBP16.2■□□□□ 0.18
PACS1-207ENST00000528935 MINDY3Q9H8M7 445 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 TUFT1Q9NNX1 390 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 TLR9Q9NR96 1032 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 AGPAT5Q9NUQ2 364 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 FAM105AQ9NUU6 356 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 FAM50BQ9Y247 325 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 LZTS1Q9Y250 596 aa16.2■□□□□ 0.18
PACS1-207ENST00000528935 ATG2AQ2TAZ0 1938 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 OR52Z1P0C646 297 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 SPATA31C1P0DKV0 1188 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 IL9P15248 144 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 U2AF2P26368 475 aaKnown RBP eCLIP16.19■□□□□ 0.18
PACS1-207ENST00000528935 PPM1AP35813 382 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 TECP42680 631 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 RARRES1P49788 294 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 POU5F1BQ06416 359 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 PCBP1Q15365 356 aaKnown RBP eCLIP16.19■□□□□ 0.18
PACS1-207ENST00000528935 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 CATSPER3Q86XQ3 398 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 FAM178BQ8IXR5 827 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 PIGOQ8TEQ8 1089 aa16.19■□□□□ 0.18
PACS1-207ENST00000528935 MRPS27Q92552 414 aaKnown RBP16.19■□□□□ 0.18
PACS1-207ENST00000528935 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
PACS1-207ENST00000528935 PUF60Q9UHX1 559 aaKnown RBP16.19■□□□□ 0.18
PACS1-207ENST00000528935 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
PACS1-207ENST00000528935 LINC01565O15544 149 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
PACS1-207ENST00000528935 HOXA11P31270 313 aaPredicted RBP16.18■□□□□ 0.18
PACS1-207ENST00000528935 ARL2P36404 184 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 NRIP1P48552 1158 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 PTENP60484 403 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 ERVFC1P60507 584 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 KRT17Q04695 432 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 DLX2Q07687 328 aaPredicted RBP16.18■□□□□ 0.18
PACS1-207ENST00000528935 TFDP1Q14186 410 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
PACS1-207ENST00000528935 EFHBQ8N7U6 833 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 ERMNQ8TAM6 284 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 LPPQ93052 612 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 PGBD4Q96DM1 585 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 TLE6Q9H808 572 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 SPG21Q9NZD8 308 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 PCDHB2Q9Y5E7 798 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 PCDHGC5Q9Y5F6 944 aa16.18■□□□□ 0.18
PACS1-207ENST00000528935 MUC3AQ02505 3323 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 PLXNA4Q9HCM2 1894 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 A0A087WWV3 80 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 FSCN2O14926 492 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 TBX10O75333 385 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 MED24O75448 989 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 GJB2P29033 226 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 PBX3P40426 434 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 LONRF3Q496Y0 759 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 MRPL10Q7Z7H8 261 aaKnown RBP16.17■□□□□ 0.18
PACS1-207ENST00000528935 IFNLR1Q8IU57 520 aaPredicted RBP16.17■□□□□ 0.18
PACS1-207ENST00000528935 C4orf32Q8N8J7 132 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 ASAP3Q8TDY4 903 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 NACC1Q96RE7 527 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 DBR1Q9UK59 544 aaKnown RBP16.17■□□□□ 0.18
PACS1-207ENST00000528935 ARID2Q68CP9 1835 aa16.17■□□□□ 0.18
PACS1-207ENST00000528935 CARNS1A5YM72 827 aa16.16■□□□□ 0.18
PACS1-207ENST00000528935 MEIS3P2A8K0S8 358 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms