RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 AGPAT5Q9NUQ2 364 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 WDR81Q562E7 1941 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 PP2D1A8MPX8 630 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 LINC00271P0C7V0 271 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 PDCP20941 246 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 KCNA5P22460 613 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 GLRA2P23416 452 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CDC25AP30304 524 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CA8P35219 290 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 ARL2P36404 184 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 RAB27AP51159 221 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 PTENP60484 403 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CAPSQ13938 189 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 ECM1Q16610 540 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CLLU1OSQ5K130 101 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 GLB1LQ6UWU2 654 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 ZBTB8OSQ8IWT0 167 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 SPPL3Q8TCT6 385 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CPB2Q96IY4 423 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 ZNF558Q96NG5 402 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 TRIM6Q9C030 488 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-216ENST00000528739 BHMT2Q9H2M3 363 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 CLDND1Q9NY35 253 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 PUF60Q9UHX1 559 aaKnown RBP15.85■□□□□ 0.13
CAPN1-216ENST00000528739 DNM3Q9UQ16 869 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 PCDHB2Q9Y5E7 798 aa15.85■□□□□ 0.13
CAPN1-216ENST00000528739 EYSQ5T1H1 3165 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 COL4A4P53420 1690 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-216ENST00000528739 FGF18O76093 207 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 SSBP05455 408 aaKnown RBP eCLIP15.84■□□□□ 0.13
CAPN1-216ENST00000528739 MUTP22033 750 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 PRPHP41219 470 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 KCNQ1P51787 676 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 KRT17Q04695 432 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 CUL4AQ13619 759 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 CSPP1Q1MSJ5 1256 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 NOTUMQ6P988 496 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 LRRC55Q6ZSA7 311 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 RBM23Q86U06 439 aaKnown RBP15.84■□□□□ 0.13
CAPN1-216ENST00000528739 DEPTORQ8TB45 409 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 URGCPQ8TCY9 931 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 IFT74Q96LB3 600 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 PLIN2Q99541 437 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 MRPL9Q9BYD2 267 aaKnown RBP15.84■□□□□ 0.13
CAPN1-216ENST00000528739 GBP3Q9H0R5 595 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 CWH43Q9H720 699 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 UBE2ZQ9H832 354 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-216ENST00000528739 POLD4Q9HCU8 107 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
CAPN1-216ENST00000528739 PRRC2BQ5JSZ5 2229 aaKnown RBP15.83■□□□□ 0.13
CAPN1-216ENST00000528739 E9PMD0 336 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 K7ELQ4 463 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-216ENST00000528739 HSP90AA1P07900 732 aaKnown RBP15.83■□□□□ 0.12
CAPN1-216ENST00000528739 CYP11B2P19099 503 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 AXLP30530 894 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 PBX3P40426 434 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 ALDH7A1P49419 539 aaKnown RBP15.83■□□□□ 0.12
CAPN1-216ENST00000528739 ATP2C1P98194 919 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-216ENST00000528739 IL17AQ16552 155 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 KCNT2Q6UVM3 1135 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 ZNF598Q86UK7 904 aaKnown RBP15.83■□□□□ 0.12
CAPN1-216ENST00000528739 IGSF22Q8N9C0 903 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 RASSF8Q8NHQ8 419 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 ADAMTS19Q8TE59 1207 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 FAM193BQ96PV7 902 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-216ENST00000528739 COL4A6Q14031 1691 aa15.83■□□□□ 0.12
CAPN1-216ENST00000528739 CHD9Q3L8U1 2897 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 NT5C1B-RDH14C9J2C7 533 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 TSPAN1O60635 241 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 ZC3H11AO75152 810 aaKnown RBP eCLIP15.82■□□□□ 0.12
CAPN1-216ENST00000528739 ITGA4P13612 1032 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 ATF7P17544 494 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-216ENST00000528739 DNAJB1P25685 340 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 HOXA11P31270 313 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-216ENST00000528739 IRS1P35568 1242 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 MBTD1Q05BQ5 628 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 POU5F1BQ06416 359 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 PCBP1Q15365 356 aaKnown RBP eCLIP15.82■□□□□ 0.12
CAPN1-216ENST00000528739 NOMO2Q5JPE7 1267 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 BRAPQ7Z569 592 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 HACE1Q8IYU2 909 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 UHRF1Q96T88 793 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-216ENST00000528739 TRAIPQ9BWF2 469 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 ENTPD7Q9NQZ7 604 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 TLR9Q9NR96 1032 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 SPG21Q9NZD8 308 aa15.82■□□□□ 0.12
CAPN1-216ENST00000528739 MEIS3P2A8K0S8 358 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 H3BQ06 376 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-216ENST00000528739 NCK2O43639 380 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 ZNF623O75123 536 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 PPM1AP35813 382 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 BCAR1P56945 870 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 UBE3AQ05086 875 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 PPP2R5AQ15172 486 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 PLPP4Q5VZY2 271 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 CDR2LQ86X02 465 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms