RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 SUPT20HL1Q3ZLR7 823 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CYB5D1Q6P9G0 228 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 MMS19Q96T76 1030 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CASZ1Q86V15 1759 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.66□□□□□ -0.7
USP35-201ENST00000526425 AFPP02771 609 aaKnown RBP10.66□□□□□ -0.7
USP35-201ENST00000526425 SNHG28P0DPA3 235 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 DLATP10515 647 aaKnown RBP10.66□□□□□ -0.7
USP35-201ENST00000526425 SLC8A1P32418 973 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 PCK1P35558 622 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 GJC1P36383 396 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CTCFP49711 727 aaPredicted RBP10.66□□□□□ -0.7
USP35-201ENST00000526425 HMGCS2P54868 508 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CETN1Q12798 172 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CUL3Q13618 768 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 TSHZ1Q6ZSZ6 1077 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 PHLDB2Q86SQ0 1253 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 SCFD1Q8WVM8 642 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 RMDN3Q96TC7 470 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 TCHPQ9BT92 498 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 L1RE1Q9UN81 338 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 RCCD1A6NED2 376 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 KCNK3O14649 394 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 FANCGO15287 622 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 VAV2P52735 878 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 PEX3P56589 373 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP35-201ENST00000526425 NLRX1Q86UT6 975 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 CCDC50Q8IVM0 306 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 RETREG2Q8NC44 543 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 GMCL1P1Q8NEA9 526 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 FAM20AQ96MK3 541 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 PLEKHG4BQ96PX9 1271 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 WDR11Q9BZH6 1224 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 TRPC6Q9Y210 931 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 CLEC11AQ9Y240 323 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 TMX2Q9Y320 296 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 ANKRD31Q8N7Z5 1873 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 COG2Q14746 738 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 ODF2Q5BJF6 829 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 KIAA1755Q5JYT7 1200 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 NBPF12Q5TAG4 269 aaPredicted RBP10.65□□□□□ -0.7
USP35-201ENST00000526425 CCDC170Q8IYT3 715 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 SH2D3CQ8N5H7 860 aa10.65□□□□□ -0.7
USP35-201ENST00000526425 ZNF668Q96K58 619 aaPredicted RBP10.65□□□□□ -0.7
USP35-201ENST00000526425 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.71
USP35-201ENST00000526425 RPS6KA5O75582 802 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 GUCY2FP51841 1108 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 NPEPPSP55786 919 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 MAP7D1Q3KQU3 841 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 EAPPQ56P03 285 aaPredicted RBP10.65□□□□□ -0.71
USP35-201ENST00000526425 PLA2G4FQ68DD2 849 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 WDR59Q6PJI9 974 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 C14orf80Q86SX3 495 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 MS4A14Q96JA4 679 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 NACC1Q96RE7 527 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 ARHGAP20Q9P2F6 1191 aa10.65□□□□□ -0.71
USP35-201ENST00000526425 MYH8P13535 1937 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 MAP2K7O14733 419 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 SLC16A4O15374 487 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 CREB3O43889 395 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 EGFRP00533 1210 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 TNFAIP3P21580 790 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 PBX1P40424 430 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 PRELPP51888 382 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 MTMR1Q13613 665 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 C8orf74Q6P047 294 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.64□□□□□ -0.71
USP35-201ENST00000526425 PPM1KQ8N3J5 372 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 RPAP3Q9H6T3 665 aaPredicted RBP10.64□□□□□ -0.71
USP35-201ENST00000526425 CSADQ9Y600 493 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 CAPN6Q9Y6Q1 641 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 ATRNL1Q5VV63 1379 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 LRRC10BA6NIK2 292 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 GNA14O95837 355 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 KRT5P13647 590 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 FUT4P22083 530 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 RPA1P27694 616 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 MAGEA8P43361 318 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 USP14P54578 494 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 GIT2Q14161 759 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 BZW1Q7L1Q6 419 aaKnown RBP10.64□□□□□ -0.71
USP35-201ENST00000526425 SIAH1Q8IUQ4 282 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 DNAJC19Q96DA6 116 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 SPATA17Q96L03 361 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 KIFC3Q9BVG8 833 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 GPRC5CQ9NQ84 441 aa10.64□□□□□ -0.71
USP35-201ENST00000526425 LARSQ9P2J5 1176 aaKnown RBP10.64□□□□□ -0.71
USP35-201ENST00000526425 CHORDC1Q9UHD1 332 aaPredicted RBP10.64□□□□□ -0.71
USP35-201ENST00000526425 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms