RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 TMEM176AQ96HP8 235 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 RIOX1Q9H6W3 641 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 PARPBPQ9NWS1 579 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 CBLCQ9ULV8 474 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 PTPN23Q9H3S7 1636 aa6.29□□□□□ -1.4
C11orf54-203ENST00000526335 CHD1O14646 1710 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 LMTK3Q96Q04 1460 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 FMN1Q68DA7 1419 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 GSTA4O15217 222 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 SLC26A4O43511 780 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 SRGAP2CP0DJJ0 459 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 CDK4P11802 303 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 NAT1P18440 290 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 JAM2P57087 298 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 GUCY1A3Q02108 690 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 TMEM200BQ69YZ2 307 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 TMPRSS6Q8IU80 811 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 PTPRN2Q92932 1015 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 SPATA9Q9BWV2 254 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 CEP72Q9P209 647 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
C11orf54-203ENST00000526335 CENPJQ9HC77 1338 aaPredicted RBP6.27□□□□□ -1.41
C11orf54-203ENST00000526335 PROB1E7EW31 1015 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 KCNK3O14649 394 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
C11orf54-203ENST00000526335 MPIG6BO95866 241 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 HGFACQ04756 655 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 CRHR2Q13324 411 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 DALRD3Q5D0E6 543 aaKnown RBP6.27□□□□□ -1.41
C11orf54-203ENST00000526335 FAM47CQ5HY64 1035 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 KANK2Q63ZY3 851 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 LRSAM1Q6UWE0 723 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 GAREM2Q75VX8 874 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 ZNF669Q96BR6 464 aaPredicted RBP6.27□□□□□ -1.41
C11orf54-203ENST00000526335 CDC6Q99741 560 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 AMNQ9BXJ7 453 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 OR10A5Q9H207 317 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 UCKL1Q9NWZ5 548 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 DDX56Q9NY93 547 aaKnown RBP6.27□□□□□ -1.41
C11orf54-203ENST00000526335 ZNHIT2Q9UHR6 403 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 GAPVD1Q14C86 1478 aa6.27□□□□□ -1.41
C11orf54-203ENST00000526335 EIF4G3O43432 1585 aaKnown RBP6.26□□□□□ -1.41
C11orf54-203ENST00000526335 KTN1Q86UP2 1357 aaKnown RBP6.26□□□□□ -1.41
C11orf54-203ENST00000526335 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 ARVCFO00192 962 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 MOGSQ13724 837 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 PLEKHG6Q3KR16 790 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 COLEC12Q5KU26 742 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 GORABQ5T7V8 394 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 GRAMD4Q6IC98 578 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 SYNPOQ8N3V7 929 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 ZBTB38Q8NAP3 1195 aaPredicted RBP6.26□□□□□ -1.41
C11orf54-203ENST00000526335 STAG1Q8WVM7 1258 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 PNNQ9H307 717 aaKnown RBP6.26□□□□□ -1.41
C11orf54-203ENST00000526335 RRAGDQ9NQL2 400 aaPredicted RBP6.26□□□□□ -1.41
C11orf54-203ENST00000526335 HECW1Q76N89 1606 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 NAIPQ13075 1403 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 FGD6Q6ZV73 1430 aa6.26□□□□□ -1.41
C11orf54-203ENST00000526335 ERCC6L2Q5T890 1561 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 FYCO1Q9BQS8 1478 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 TRBV23-1A0A0A0MS06 115 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 A0A0A6YYK5 440 aaPredicted RBP6.25□□□□□ -1.41
C11orf54-203ENST00000526335 CCDC66A2RUB6 948 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 PMS2P1A4D2B8 440 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 HMGB1P1B2RPK0 211 aaPredicted RBP6.25□□□□□ -1.41
C11orf54-203ENST00000526335 ADCY3O60266 1144 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 GCP02774 474 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 MMEP08473 750 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 DNM2P50570 870 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 STAT5BP51692 787 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
C11orf54-203ENST00000526335 PRIMA1Q86XR5 153 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 EXOC6Q8TAG9 804 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 MPHOSPH9Q99550 1183 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 SMURF1Q9HCE7 757 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 MIA2Q96PC5 1412 aa6.25□□□□□ -1.41
C11orf54-203ENST00000526335 LRPPRCP42704 1394 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 CUX1P39880 1505 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 PARNO95453 639 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 LMNAP02545 664 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 PROZP22891 400 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 CNGA1P29973 690 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 RRP1BQ14684 758 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 ZC3H7AQ8IWR0 971 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 PNISRQ8TF01 805 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 AGO3Q9H9G7 860 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 RCAN3Q9UKA8 241 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 G3BP2Q9UN86 482 aaKnown RBP6.24□□□□□ -1.41
C11orf54-203ENST00000526335 PLAAQ9Y263 795 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 SPATA31E1Q6ZUB1 1445 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 CASKIN1Q8WXD9 1431 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 KIF7Q2M1P5 1343 aa6.24□□□□□ -1.41
C11orf54-203ENST00000526335 ROCK2O75116 1388 aaKnown RBP6.23□□□□□ -1.41
C11orf54-203ENST00000526335 INSRP06213 1382 aa6.23□□□□□ -1.41
C11orf54-203ENST00000526335 DHX29Q7Z478 1369 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms