RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 A0A087WWV3 80 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 CCDC196A0A1B0GTZ2 297 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 EML1O00423 815 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 STBD1O95210 358 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 ALDH2P05091 517 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 CFHP08603 1231 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 CTSAP10619 480 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 GBP2P32456 591 aaPredicted RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 DNM2P50570 870 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 AK2P54819 239 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 SETQ01105 290 aaPredicted RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 STK3Q13188 491 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 TARBP2Q15633 366 aaKnown RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 XKR3Q5GH77 459 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 BLOC1S2Q6QNY1 142 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 GLB1LQ6UWU2 654 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 DDX53Q86TM3 631 aaKnown RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 PALB2Q86YC2 1186 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 UBALD2Q8IYN6 164 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 ADSSL1Q8N142 457 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 CCDC12Q8WUD4 166 aaPredicted RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 RIN2Q8WYP3 895 aaPredicted RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 SLC5A5Q92911 643 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 TMEM143Q96AN5 459 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 AIFM3Q96NN9 605 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 NECTIN4Q96NY8 510 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 FAM193BQ96PV7 902 aaPredicted RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 APOL6Q9BWW8 343 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 MRPL9Q9BYD2 267 aaKnown RBP7.39□□□□□ -1.23
CD44-221ENST00000526000 IRF2BPLQ9H1B7 796 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 PCDHB2Q9Y5E7 798 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 SNX14Q9Y5W7 946 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 CACNA1HO95180 2353 aa7.39□□□□□ -1.23
CD44-221ENST00000526000 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 ESYT2A0FGR8 921 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 FSD2A1L4K1 749 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 PRR23AA6NEV1 266 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 F8W810 466 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 NRP1O14786 923 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 ZBTB39O15060 712 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 RFPL2O75678 378 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 PSMD10O75832 226 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 NPR3P17342 541 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 PDIA3P30101 505 aaKnown RBP7.38□□□□□ -1.23
CD44-221ENST00000526000 OR1G1P47890 313 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 USP11P51784 963 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 JAK3P52333 1124 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
CD44-221ENST00000526000 KRT32Q14532 448 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 PTPN14Q15678 1187 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 NTRK3Q16288 839 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 INF2Q27J81 1249 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 BMP2KLQ5H9B9 411 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 SPECC1Q5M775 1068 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 KIAA1841Q6NSI8 718 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 AGMOQ6ZNB7 445 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 GPR149Q86SP6 731 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 ZDHHC14Q8IZN3 488 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 SIX5Q8N196 739 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 PLCD3Q8N3E9 789 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 BICD2Q8TD16 824 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 NKD2Q969F2 451 aaPredicted RBP7.38□□□□□ -1.23
CD44-221ENST00000526000 ACSF2Q96CM8 615 aaPredicted RBP7.38□□□□□ -1.23
CD44-221ENST00000526000 CPB2Q96IY4 423 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 B3GALT6Q96L58 329 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 CEP89Q96ST8 783 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 RIT2Q99578 217 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 NIFKQ9BYG3 293 aaKnown RBP7.38□□□□□ -1.23
CD44-221ENST00000526000 RNF39Q9H2S5 420 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 MINDY3Q9H8M7 445 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 KCNK12Q9HB15 430 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 CHST12Q9NRB3 414 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 MIOSQ9NXC5 875 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 CA14Q9ULX7 337 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 KCNJ14Q9UNX9 436 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 FNDC1Q4ZHG4 1894 aaPredicted RBP7.38□□□□□ -1.23
CD44-221ENST00000526000 KIAA1671Q9BY89 1806 aa7.38□□□□□ -1.23
CD44-221ENST00000526000 CCDC195A0A1B0GUA6 201 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 MARCH6O60337 910 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 CDC45O75419 566 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 MAFO75444 373 aaPredicted RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 HMGB1P09429 215 aaKnown RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 RFX1P22670 979 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 SFPQP23246 707 aaKnown RBP eCLIP7.37□□□□□ -1.23
CD44-221ENST00000526000 RPS6KB1P23443 525 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 SFNP31947 248 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 POLGP54098 1239 aaPredicted RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 TDGQ13569 410 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 LETM2Q2VYF4 491 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 CWF19L1Q69YN2 538 aaKnown RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 MCTP2Q6DN12 878 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 CCDC149Q6ZUS6 474 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 ANO5Q75V66 913 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 OTOP3Q7RTS5 596 aa7.37□□□□□ -1.23
CD44-221ENST00000526000 CDR2LQ86X02 465 aaPredicted RBP7.37□□□□□ -1.23
CD44-221ENST00000526000 DTWD2Q8NBA8 298 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms