RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 WASP42768 502 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 SLC16A1P53985 500 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 PURAQ00577 322 aaKnown RBP5.91□□□□□ -1.46
CD44-220ENST00000525688 PPARAQ07869 468 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 ADAM9Q13443 819 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 UBE4AQ14139 1066 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 IFIT1BQ5T764 474 aaKnown RBP5.91□□□□□ -1.46
CD44-220ENST00000525688 PRR18Q8N4B5 295 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 PPP1R14CQ8TAE6 165 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 WDR48Q8TAF3 677 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 SMARCC2Q8TAQ2 1214 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 MZB1Q8WU39 189 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 FAM168AQ92567 244 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 HPS3Q969F9 1004 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 PAWRQ96IZ0 340 aaKnown RBP5.91□□□□□ -1.46
CD44-220ENST00000525688 TAAR9Q96RI9 348 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 NOL10Q9BSC4 688 aaKnown RBP5.91□□□□□ -1.46
CD44-220ENST00000525688 ACE2Q9BYF1 805 aaPredicted RBP5.91□□□□□ -1.46
CD44-220ENST00000525688 ZNF700Q9H0M5 742 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 FAM53CQ9NYF3 392 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 EVLQ9UI08 416 aaPredicted RBP5.91□□□□□ -1.46
CD44-220ENST00000525688 SCOCQ9UIL1 159 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 SERPINB13Q9UIV8 391 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 ZFP69BQ9UJL9 534 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 COMMD10Q9Y6G5 202 aa5.91□□□□□ -1.46
CD44-220ENST00000525688 SYNJ2O15056 1496 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 PLIN1O60240 522 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 NRP2O60462 931 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 SEC24DO94855 1032 aaPredicted RBP5.9□□□□□ -1.46
CD44-220ENST00000525688 TRIM27P14373 513 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 CDR1P51861 262 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 CDK17Q00537 523 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 KIF23Q02241 960 aaPredicted RBP5.9□□□□□ -1.46
CD44-220ENST00000525688 MAP3K12Q12852 859 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 MALLQ13021 153 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 ADRM1Q16186 407 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 DGKDQ16760 1214 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 CYB5RLQ6IPT4 315 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 LILRA6Q6PI73 481 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 MPZL3Q6UWV2 235 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 USP45Q70EL2 814 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 OR5AN1Q8NGI8 311 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 LIN37Q96GY3 246 aaPredicted RBP5.9□□□□□ -1.46
CD44-220ENST00000525688 HIST1H2AHQ96KK5 128 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 LRGUKQ96M69 825 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 CLIC6Q96NY7 704 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 HIST1H2AJQ99878 128 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 SYT3Q9BQG1 590 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 GORASP1Q9BQQ3 440 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 TACO1Q9BSH4 297 aaKnown RBP5.9□□□□□ -1.46
CD44-220ENST00000525688 GTPBP4Q9BZE4 634 aaKnown RBP5.9□□□□□ -1.46
CD44-220ENST00000525688 MCOLN1Q9GZU1 580 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 EPB41L4BQ9H329 900 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 C1orf112Q9NSG2 853 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 SYNPO2Q9UMS6 1093 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 USP18Q9UMW8 372 aa5.9□□□□□ -1.46
CD44-220ENST00000525688 PBRM1Q86U86 1689 aa5.9□□□□□ -1.47
CD44-220ENST00000525688 CHD1O14646 1710 aa5.9□□□□□ -1.47
CD44-220ENST00000525688 CARMIL2Q6F5E8 1435 aa5.9□□□□□ -1.47
CD44-220ENST00000525688 ERICH3Q5RHP9 1530 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 EXOC5O00471 708 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 N4BP3O15049 544 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 AP1G1O43747 822 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 SEMA7AO75326 666 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 PDCP20941 246 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 GLRBP48167 497 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 CD83Q01151 205 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 RTP5Q14D33 572 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 ARHGAP29Q52LW3 1261 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 TMEM200BQ69YZ2 307 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 GRAMD4Q6IC98 578 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 BTNL9Q6UXG8 535 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 GAREM2Q75VX8 874 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 CHST15Q7LFX5 561 aaPredicted RBP5.89□□□□□ -1.47
CD44-220ENST00000525688 IGDCC3Q8IVU1 814 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 PPM1NQ8N819 430 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 TTLL6Q8N841 843 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 KYQ8NBH2 561 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 SENP7Q9BQF6 1050 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 C11orf84Q9BUA3 381 aaPredicted RBP5.89□□□□□ -1.47
CD44-220ENST00000525688 SARGQ9BW04 601 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 GREM2Q9H772 168 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.89□□□□□ -1.47
CD44-220ENST00000525688 FBXO10Q9UK96 956 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 PTPN22Q9Y2R2 807 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 IPPQ9Y573 584 aa5.89□□□□□ -1.47
CD44-220ENST00000525688 A0A0A6YYK5 440 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 HTRA2O43464 458 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 CTNND1O60716 968 aaKnown RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 CYP7B1O75881 506 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 XPAP23025 273 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 EDNRBP24530 442 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 NCKAP1LP55160 1127 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 ANTXR2P58335 489 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 FOXO4P98177 505 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 HDAC1Q13547 482 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 ZNF267Q14586 743 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 GRM3Q14832 879 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms