RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SP3Q02447 781 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 KCNH2Q12809 1159 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 IRF5Q13568 498 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 IER5Q5VY09 327 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 ZSWIM2Q8NEG5 633 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 TRPV1Q8NER1 839 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 BICD1Q96G01 975 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 METTL14Q9HCE5 456 aaKnown RBP16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 HSPBP1Q9NZL4 362 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
CTNNA1-236ENST00000522792 H0YCG3 227 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 GJB1P08034 283 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 HOXD8P13378 290 aaPredicted RBP16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 CNGA1P29973 690 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 VEGFBP49765 207 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 CLCN3P51790 818 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 TRIM14Q14142 442 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 EFCAB12Q6NXP0 572 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 SLC39A4Q6P5W5 647 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 SLC9A9Q8IVB4 645 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 PPP1R13LQ8WUF5 828 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 PSPC1Q8WXF1 523 aaKnown RBP16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 BORCS6Q96GS4 357 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 ZNF668Q96K58 619 aaPredicted RBP16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 RNF186Q9NXI6 227 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 SIK3Q9Y2K2 1263 aa16.9■□□□□ 0.3
CTNNA1-236ENST00000522792 TTC26A0AVF1 554 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 GOLGA8IPA6NC78 632 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 A6NJR5 290 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 GOLGA8JA6NMD2 632 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 HNRNPDLO14979 420 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 C22orf31O95567 290 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 TRIM21P19474 475 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 ADSSP30520 456 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 LAMTOR4Q0VGL1 99 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 STRN3Q13033 797 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 KIF22Q14807 665 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 C12orf56Q8IXR9 622 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 EXOC8Q8IYI6 725 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 JPH2Q9BR39 696 aaPredicted RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 CRACR2AQ9BSW2 395 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 MKNK1Q9BUB5 465 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 FAM207AQ9NSI2 230 aaPredicted RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 KCNG1Q9UIX4 513 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 NRDCO43847 1150 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 GAS2O43903 313 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 KLRC1P26715 233 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 BEX3Q00994 111 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 KCNMA1Q12791 1236 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 TRIM32Q13049 653 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 TMEM139Q8IV31 216 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 CNGA4Q8IV77 575 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 XXYLT1Q8NBI6 393 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 SAAL1Q96ER3 474 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 BAG1Q99933 345 aaPredicted RBP16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 AP5M1Q9H0R1 490 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 TMX1Q9H3N1 280 aa16.89■□□□□ 0.29
CTNNA1-236ENST00000522792 K7ERI5 159 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 EPHB6O15197 1021 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 KRT9P35527 623 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 SNRPFP62306 86 aaKnown RBP16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 PPFIA1Q13136 1202 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 MFSD14CQ5VZR4 134 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 RNF149Q8NC42 400 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 CCDC112Q8NEF3 446 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 SLC35C1Q96A29 364 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 NLRP4Q96MN2 994 aa16.88■□□□□ 0.29
CTNNA1-236ENST00000522792 ADCY3O60266 1144 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 EDN1P05305 212 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 MYL3P08590 195 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 TRIM49P0CI25 452 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 TRIM49CP0CI26 452 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 AKR1A1P14550 325 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 LIG4P49917 911 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 MXD4Q14582 209 aaPredicted RBP16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 NUP58Q9BVL2 599 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 TTYH3Q9C0H2 523 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 ABHD10Q9NUJ1 306 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 AGPAT5Q9NUQ2 364 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 CAPN11Q9UMQ6 739 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 SIP14410 1827 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 CYBAP13498 195 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 PPP2R3AQ06190 1150 aa16.87■□□□□ 0.29
CTNNA1-236ENST00000522792 GRIK4Q16099 956 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms