RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 PTPAQ15257 358 aa24.31■■□□□ 1.48
HOXA3-205ENST00000522456 PADI6Q6TGC4 694 aa24.31■■□□□ 1.48
HOXA3-205ENST00000522456 EP400NLQ6ZTU2 488 aa24.31■■□□□ 1.48
HOXA3-205ENST00000522456 MAEAQ7L5Y9 396 aa24.31■■□□□ 1.48
HOXA3-205ENST00000522456 INO80BQ9C086 356 aaPredicted RBP24.31■■□□□ 1.48
HOXA3-205ENST00000522456 BHMT2Q9H2M3 363 aa24.31■■□□□ 1.48
HOXA3-205ENST00000522456 ARIH1Q9Y4X5 557 aaPredicted RBP24.31■■□□□ 1.48
HOXA3-205ENST00000522456 TTC3P53804 2025 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 E9PMD0 336 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 STAG3L1P0CL83 205 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 FGFR4P22455 802 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 MARCKSP29966 332 aaPredicted RBP24.3■■□□□ 1.48
HOXA3-205ENST00000522456 LONP1P36776 959 aaKnown RBP24.3■■□□□ 1.48
HOXA3-205ENST00000522456 BMPR1AP36894 532 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 MXD4Q14582 209 aaPredicted RBP24.3■■□□□ 1.48
HOXA3-205ENST00000522456 LINC01599Q8WXQ3 324 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 CDK5RAP3Q96JB5 506 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 ZNF396Q96N95 335 aaPredicted RBP24.3■■□□□ 1.48
HOXA3-205ENST00000522456 USP28Q96RU2 1077 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 ADAM2Q99965 735 aa24.3■■□□□ 1.48
HOXA3-205ENST00000522456 UBA7P41226 1012 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 CABP7Q86V35 215 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 NPAS4Q8IUM7 802 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 RNF149Q8NC42 400 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 MCPH1Q8NEM0 835 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 CLP1Q92989 425 aaKnown RBP24.29■■□□□ 1.48
HOXA3-205ENST00000522456 PLIN2Q99541 437 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 NT5C3AQ9H0P0 336 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 LMAN2LQ9H0V9 348 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 C1orf112Q9NSG2 853 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 CLDND1Q9NY35 253 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 FAM50BQ9Y247 325 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 ATG2AQ2TAZ0 1938 aa24.29■■□□□ 1.48
HOXA3-205ENST00000522456 GRM6O15303 877 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 MGEA5O60502 916 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 EYA4O95677 639 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 F13A1P00488 732 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 ZSCAN20P17040 1043 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 IBSPP21815 317 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 SFPQP23246 707 aaKnown RBP eCLIP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 ARL2P36404 184 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 GRIN1Q05586 938 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 PKP1Q13835 747 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 TFDP1Q14186 410 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 BTG3Q14201 252 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 FAM102BQ5T8I3 360 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 ZNF689Q96CS4 500 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 POLR3FQ9H1D9 316 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 IFT122Q9HBG6 1241 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 RGS18Q9NS28 235 aa24.28■■□□□ 1.48
HOXA3-205ENST00000522456 TFIP11Q9UBB9 837 aaKnown RBP24.28■■□□□ 1.48
HOXA3-205ENST00000522456 NCK2O43639 380 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 CYP11B2P19099 503 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 SLC39A14Q15043 492 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 FOXD4L6Q3SYB3 417 aaPredicted RBP24.27■■□□□ 1.48
HOXA3-205ENST00000522456 HYIQ5T013 277 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 FOXD4L3Q6VB84 417 aaPredicted RBP24.27■■□□□ 1.48
HOXA3-205ENST00000522456 ASAP3Q8TDY4 903 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 CALML4Q96GE6 196 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 PNMA5Q96PV4 448 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 GPRC5CQ9NQ84 441 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 DAXXQ9UER7 740 aaPredicted RBP24.27■■□□□ 1.48
HOXA3-205ENST00000522456 LRFN2Q9ULH4 789 aa24.27■■□□□ 1.48
HOXA3-205ENST00000522456 SRPRBQ9Y5M8 271 aaKnown RBP24.27■■□□□ 1.48
HOXA3-205ENST00000522456 DGKIO75912 1065 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 PHKA2P46019 1235 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 SARSP49591 514 aaKnown RBP24.26■■□□□ 1.47
HOXA3-205ENST00000522456 STK38Q15208 465 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 SLC24A5Q71RS6 500 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 CATSPER4Q7RTX7 472 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 KCNK18Q7Z418 384 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 SRGAP1Q7Z6B7 1085 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 KCTD17Q8N5Z5 321 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 RASSF8Q8NHQ8 419 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 CSRNP2Q9H175 543 aa24.26■■□□□ 1.47
HOXA3-205ENST00000522456 FBXO2Q9UK22 296 aaPredicted RBP24.26■■□□□ 1.47
HOXA3-205ENST00000522456 SLC26A4O43511 780 aa24.25■■□□□ 1.47
HOXA3-205ENST00000522456 GLRA2P23416 452 aa24.25■■□□□ 1.47
HOXA3-205ENST00000522456 DSC3Q14574 896 aa24.25■■□□□ 1.47
HOXA3-205ENST00000522456 PLVAPQ9BX97 442 aa24.25■■□□□ 1.47
HOXA3-205ENST00000522456 PRKAG3Q9UGI9 489 aa24.25■■□□□ 1.47
HOXA3-205ENST00000522456 PCDHB7Q9Y5E2 793 aa24.25■■□□□ 1.47
HOXA3-205ENST00000522456 SSBP05455 408 aaKnown RBP eCLIP24.24■■□□□ 1.47
HOXA3-205ENST00000522456 ALADP13716 330 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 LTBRP36941 435 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 NASPP49321 788 aaPredicted RBP24.24■■□□□ 1.47
HOXA3-205ENST00000522456 ZP2Q05996 745 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 POU5F1BQ06416 359 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 HYAL1Q12794 435 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 CAPSQ13938 189 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 CTC1Q2NKJ3 1217 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 SPECC1Q5M775 1068 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 CMTR2Q8IYT2 770 aaKnown RBP24.24■■□□□ 1.47
HOXA3-205ENST00000522456 CRIPAKQ8N1N5 446 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 CLIC6Q96NY7 704 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 MINDY3Q9H8M7 445 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 POLD4Q9HCU8 107 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 CHST12Q9NRB3 414 aa24.24■■□□□ 1.47
HOXA3-205ENST00000522456 PRR33A8MZF0 331 aa24.23■■□□□ 1.47
HOXA3-205ENST00000522456 C9IYK1 514 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms