RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, human

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD74-208	ENST00000522246	GLT1D1	Q96MS3	346 aa		11.65	□□□□□ -0.54
CD74-208	ENST00000522246	MED15	Q96RN5	788 aa		11.65	□□□□□ -0.54
CD74-208	ENST00000522246	DUSP9	Q99956	384 aa	Known RBP	11.65	□□□□□ -0.54
CD74-208	ENST00000522246	MYADML2	A6NDP7	307 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	KBTBD13	C9JR72	458 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	KIAA0391	O15091	583 aa	Known RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SERPINC1	P01008	464 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SRGAP2C	P0DJJ0	459 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	CYP2C9	P11712	490 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	HOXC8	P31273	242 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	HOXD13	P35453	343 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	PHKA2	P46019	1235 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	ACLY	P53396	1101 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SOX10	P56693	466 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	CHMP4BP1	P59074	171 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	PTEN	P60484	403 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	PLCB2	Q00722	1185 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	NBPF20	Q3BBV1	942 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SLFN12L	Q6IEE8	588 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	RSPH3	Q86UC2	560 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	RHPN2	Q8IUC4	686 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	MAP4K3	Q8IVH8	894 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	C12orf56	Q8IXR9	622 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	KIAA0319L	Q8IZA0	1049 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	LRRC71	Q8N4P6	559 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	GLIS3	Q8NEA6	775 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SH3TC2	Q8TF17	1288 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	BSND	Q8WZ55	320 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	VTI1A	Q96AJ9	217 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	FGFBP2	Q9BYJ0	223 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	TRIM5	Q9C035	493 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	INO80B	Q9C086	356 aa	Predicted RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	PAK6	Q9NQU5	681 aa	Predicted RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SAMSN1	Q9NSI8	373 aa	Known RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	HDAC6	Q9UBN7	1215 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	LIMA1	Q9UHB6	759 aa	Known RBP	11.64	□□□□□ -0.55
CD74-208	ENST00000522246	AKT3	Q9Y243	479 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	SCN10A	Q9Y5Y9	1956 aa		11.64	□□□□□ -0.55
CD74-208	ENST00000522246	TRIM49B	A6NDI0	452 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	TGFB1I1	O43294	461 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	MYCN	P04198	464 aa	Predicted RBP	11.63	□□□□□ -0.55
CD74-208	ENST00000522246	GART	P22102	1010 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	CLCN3	P51790	818 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	PMS1	P54277	932 aa	Known RBP	11.63	□□□□□ -0.55
CD74-208	ENST00000522246	IRX5	P78411	483 aa	Predicted RBP	11.63	□□□□□ -0.55
CD74-208	ENST00000522246	FANCC	Q00597	558 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	PPP2R3A	Q06190	1150 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	NCBP1	Q09161	790 aa	Known RBP	11.63	□□□□□ -0.55
CD74-208	ENST00000522246	CAPS	Q13938	189 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	MAPK6	Q16659	721 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	TCP11X2	Q5H9J9	407 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	ZPBP2	Q6X784	338 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	SRGAP1	Q7Z6B7	1085 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	RNF149	Q8NC42	400 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	PRIMPOL	Q96LW4	560 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	MKNK1	Q9BUB5	465 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	RNF208	Q9H0X6	261 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	UNC93B1	Q9H1C4	597 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	HSD3B7	Q9H2F3	369 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	METTL14	Q9HCE5	456 aa	Known RBP	11.63	□□□□□ -0.55
CD74-208	ENST00000522246	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.63	□□□□□ -0.55
CD74-208	ENST00000522246	GTF2IRD1	Q9UHL9	959 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	FRMD4B	Q9Y2L6	1034 aa		11.63	□□□□□ -0.55
CD74-208	ENST00000522246	PCNT	O95613	3336 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	KCNJ18	B7U540	433 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	DNM1L	O00429	736 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	ACKR2	O00590	384 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	MAPK13	O15264	365 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	SLC16A3	O15427	465 aa	Known RBP	11.62	□□□□□ -0.55
CD74-208	ENST00000522246	PIGR	P01833	764 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	NR3C1	P04150	777 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	CCL5	P13501	91 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	NR2F2	P24468	414 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	PSMC2	P35998	433 aa	Known RBP	11.62	□□□□□ -0.55
CD74-208	ENST00000522246	LBX1	P52954	281 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	UBASH3A	P57075	661 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	DRP2	Q13474	957 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	ITGA7	Q13683	1181 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	KCNJ12	Q14500	433 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	FAM187B	Q17R55	369 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.62	□□□□□ -0.55
CD74-208	ENST00000522246	FRMD5	Q7Z6J6	570 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	RPAIN	Q86UA6	219 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	BICD1	Q96G01	975 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	MRFAP1L1	Q96HT8	127 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	MRPL4	Q9BYD3	311 aa	Known RBP	11.62	□□□□□ -0.55
CD74-208	ENST00000522246	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.62	□□□□□ -0.55
CD74-208	ENST00000522246	FZD8	Q9H461	694 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	KIAA1586	Q9HCI6	787 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	AGPAT3	Q9NRZ7	376 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	DMAC2	Q9NW81	257 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	OGDHL	Q9ULD0	1010 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246	PHF24	Q9UPV7	400 aa		11.62	□□□□□ -0.55
CD74-208	ENST00000522246		A0A0U1RQG5	324 aa	Predicted RBP	11.61	□□□□□ -0.55
CD74-208	ENST00000522246	HNRNPDL	O14979	420 aa	Known RBP	11.61	□□□□□ -0.55
CD74-208	ENST00000522246	TREH	O43280	583 aa		11.61	□□□□□ -0.55
CD74-208	ENST00000522246	ADCY5	O95622	1261 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms