RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 CUTAO60888 179 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 MED24O75448 989 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 THBS1P07996 1170 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 CDC25AP30304 524 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 PSMC6P62333 389 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 CYP4A11Q02928 519 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 USP4Q13107 963 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 CTTNQ14247 550 aaKnown RBP9.33□□□□□ -0.92
VPS13B-210ENST00000521932 ECM1Q16610 540 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 UGCGQ16739 394 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 ADALQ6DHV7 355 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 ANKRD33Q7Z3H0 272 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 TPH2Q8IWU9 490 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 C7orf31Q8N865 590 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 LEO1Q8WVC0 666 aaPredicted RBP9.33□□□□□ -0.92
VPS13B-210ENST00000521932 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 CLIC6Q96NY7 704 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 LXNQ9BS40 222 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 GTF2IRD1Q9UHL9 959 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 SCN10AQ9Y5Y9 1956 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 RRN3P2A6NIE6 340 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 PP2D1A8MPX8 630 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 CD4P01730 458 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 SMIM10L2AP0DMW4 78 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 SMIM10L2BP0DMW5 78 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 GNAT1P11488 350 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 INSRRP14616 1297 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 NCLP19338 710 aaKnown RBP9.32□□□□□ -0.92
VPS13B-210ENST00000521932 MARK3P27448 753 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 YWHABP31946 246 aaKnown RBP9.32□□□□□ -0.92
VPS13B-210ENST00000521932 CCT6AP40227 531 aaKnown RBP9.32□□□□□ -0.92
VPS13B-210ENST00000521932 UBA7P41226 1012 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 RGS19P49795 217 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 PRKCEQ02156 737 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 TARBP2Q15633 366 aaKnown RBP9.32□□□□□ -0.92
VPS13B-210ENST00000521932 MARCH8Q5T0T0 291 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 ANO5Q75V66 913 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 OTUD6AQ7L8S5 288 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 FAM126BQ8IXS8 530 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 SNX29Q8TEQ0 813 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 EPSTI1Q96J88 318 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 NACC1Q96RE7 527 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 CEP89Q96ST8 783 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 NT5C3AQ9H0P0 336 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 ANKEF1Q9NU02 776 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 PPME1Q9Y570 386 aa9.32□□□□□ -0.92
VPS13B-210ENST00000521932 MROH7Q68CQ1 1323 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 KDM3AQ9Y4C1 1321 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 C17orf102A2RUQ5 167 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 MBLAC1A4D2B0 266 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-210ENST00000521932 ZBTB42B2RXF5 422 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 ZBTB39O15060 712 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 B4GALT4O60513 344 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 ME1P48163 572 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 GRB10Q13322 594 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 GRIK4Q16099 956 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 LRRC26Q2I0M4 334 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 ZNF484Q5JVG2 852 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 SPECC1Q5M775 1068 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 GDF6Q6KF10 455 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-210ENST00000521932 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 USP49Q70CQ1 688 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 TAS1R3Q7RTX0 852 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 CABP7Q86V35 215 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 PNMA5Q96PV4 448 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 CTAGE1Q96RT6 745 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 GAS2L1Q99501 681 aaPredicted RBP9.31□□□□□ -0.92
VPS13B-210ENST00000521932 SETD4Q9NVD3 440 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 DBR1Q9UK59 544 aaKnown RBP9.31□□□□□ -0.92
VPS13B-210ENST00000521932 COL1A2P08123 1366 aa9.31□□□□□ -0.92
VPS13B-210ENST00000521932 IGKV6-21A0A0C4DH24 114 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 FAM237AA0A1B0GTK4 181 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 A0A1W2PQ27 194 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 A0A1W2PQ64 194 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 A0A1W2PQD8 194 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 CMA1P23946 247 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 KLRC1P26715 233 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 PHKA2P46019 1235 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 RARRES1P49788 294 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 RTP1P59025 263 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 PPFIA1Q13136 1202 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 PTGISQ16647 500 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 TRIM60Q495X7 471 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 RESP18Q5W5W9 173 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 ZNF385CQ66K41 422 aaPredicted RBP9.3□□□□□ -0.92
VPS13B-210ENST00000521932 MTHFD1LQ6UB35 978 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 RIPOR1Q6ZS17 1223 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 RPAINQ86UA6 219 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 TMEM87AQ8NBN3 555 aa9.3□□□□□ -0.92
VPS13B-210ENST00000521932 PIGOQ8TEQ8 1089 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms