RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 GIT2Q14161 759 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 NONOQ15233 471 aaKnown RBP eCLIP7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 ST3GAL2Q16842 350 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 KIAA0319Q5VV43 1072 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 CCDC149Q6ZUS6 474 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 ABI1Q8IZP0 508 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 LRRC43Q8N309 656 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 C12orf76Q8N812 135 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 BORCS6Q96GS4 357 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 CASD1Q96PB1 797 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 UCN2Q96RP3 112 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 KRT23Q9C075 422 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 RIOX1Q9H6W3 641 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 IGSF9Q9P2J2 1179 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 WNT16Q9UBV4 365 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 ST3GAL5Q9UNP4 418 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 GINS2Q9Y248 185 aa7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 NOC2LQ9Y3T9 749 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-217ENST00000519634 MYH7P12883 1935 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 EPG5Q9HCE0 2579 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 MAFGO15525 162 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 LZTS3O60299 673 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 ATP9AO75110 1047 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 SP9P0CG40 484 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 ARP10275 920 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 CA8P35219 290 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 RAB15P59190 212 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 MTMR1Q13613 665 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 PLCB4Q15147 1175 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 MTHFD1LQ6UB35 978 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 LRRC55Q6ZSA7 311 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 PLPPR4Q7Z2D5 763 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 CABP7Q86V35 215 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 PPFIBP1Q86W92 1011 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 SLC39A11Q8N1S5 342 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 DCLK2Q8N568 766 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 RIN2Q8WYP3 895 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 PCYT2Q99447 389 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 CNNM2Q9H8M5 875 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 KCNK12Q9HB15 430 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 SALL3Q9BXA9 1300 aa7.4□□□□□ -1.22
CTNNA1-217ENST00000519634 TTC3P53804 2025 aa7.4□□□□□ -1.23
CTNNA1-217ENST00000519634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 PRR5-ARHGAP8B1AHC4 643 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 ATP9BO43861 1147 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 KINO60870 393 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 EPCAMP16422 314 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 ITGB5P18084 799 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 PBX3P40426 434 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 ALDH7A1P49419 539 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 SLC26A2P50443 739 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 STAT5BP51692 787 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 CRYBB1P53674 252 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 POLGP54098 1239 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 ATXN1P54253 815 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 WDR4P57081 412 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 ARHGAP8P85298 464 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 DSC3Q14574 896 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 GRM4Q14833 912 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 IMMTQ16891 758 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 SLC35G1Q2M3R5 365 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 PHLDB3Q6NSJ2 640 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 USP17L6PQ6QN14 398 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 TMC5Q6UXY8 1006 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 FAM228AQ86W67 206 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 C1orf210Q8IVY1 113 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 KIAA0319LQ8IZA0 1049 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 VPS52Q8N1B4 723 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 PLPP7Q8NBV4 271 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 SLC22A17Q8WUG5 538 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 TRAPPC12Q8WVT3 735 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 TMEM40Q8WWA1 233 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 SECISBP2LQ93073 1101 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 TMEM169Q96HH4 297 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 TBC1D17Q9HA65 648 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 JPH1Q9HDC5 661 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 RNF19AQ9NV58 838 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 SLC9A2Q9UBY0 812 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 IRAK3Q9Y616 596 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 DMXL1Q9Y485 3027 aa7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 EP300Q09472 2414 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-217ENST00000519634 NLRC5Q86WI3 1866 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 KRBA1A5PL33 1030 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 MEIS2O14770 477 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 CYTH3O43739 400 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 NARSO43776 548 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 HBP1O60381 514 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 ZIC2O95409 532 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 CTSAP10619 480 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 SRFP11831 508 aa7.38□□□□□ -1.23
CTNNA1-217ENST00000519634 SKIP12755 728 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms