RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 CRBNQ96SW2 442 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 SLC9A7Q96T83 725 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 P2RX7Q99572 595 aaKnown RBP7.48□□□□□ -1.21
CCDC6-203ENST00000518638 PAGR1Q9BTK6 254 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 PORCNQ9H237 461 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 MTIF3Q9H2K0 278 aaKnown RBP7.48□□□□□ -1.21
CCDC6-203ENST00000518638 DHX36Q9H2U1 1008 aaKnown RBP7.48□□□□□ -1.21
CCDC6-203ENST00000518638 EPB41L4BQ9H329 900 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 TXNRD2Q9NNW7 524 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 RBPJLQ9UBG7 517 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 ST14Q9Y5Y6 855 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 MROH7-TTC4A0A0A0MT08 1334 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 PRUNE2Q8WUY3 3088 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 NCOR1O75376 2440 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 RBAK-RBAKDNI3L0D1 243 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 LDHCP07864 332 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 ACRP10323 421 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 RNF4P78317 190 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 GJC2Q5T442 439 aaPredicted RBP7.47□□□□□ -1.21
CCDC6-203ENST00000518638 WDR78Q5VTH9 848 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 SLC4A10Q6U841 1118 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 DBX2Q6ZNG2 339 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 CCDC129Q6ZRS4 1044 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 DTWD2Q8NBA8 298 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 OR6P1Q8NGX9 317 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 PPM1EQ8WY54 764 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 SNX27Q96L92 541 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.47□□□□□ -1.21
CCDC6-203ENST00000518638 PI4KBQ9UBF8 816 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 MSRAQ9UJ68 235 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 MROH7Q68CQ1 1323 aa7.47□□□□□ -1.21
CCDC6-203ENST00000518638 GPR75-ASB3A0A0A6YYF3 556 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 TRIM43BA6NCK2 446 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 EYA2O00167 538 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 STRNO43815 780 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 NUAK1O60285 661 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 GUCY2CP25092 1073 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 GDNFP39905 211 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 USP14P54578 494 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 CHMP4BP1P59074 171 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 PPIGQ13427 754 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 SF3A1Q15459 793 aaKnown RBP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 ATP2B3Q16720 1220 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 PSRC1Q6PGN9 363 aaPredicted RBP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 ATF7IPQ6VMQ6 1270 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 LBX2Q6XYB7 198 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 RNF180Q86T96 592 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 DPP9Q86TI2 863 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 SLC43A3Q8NBI5 491 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 HERVK_113Q902F9 699 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 TRIM43Q96BQ3 446 aaPredicted RBP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 KAZALD1Q96I82 304 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 SHDQ96IW2 340 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 DDX4Q9NQI0 724 aaKnown RBP7.46□□□□□ -1.22
CCDC6-203ENST00000518638 SEMA3GQ9NS98 782 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 ABCF2Q9UG63 623 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 NRBP1Q9UHY1 535 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 KCNH3Q9ULD8 1083 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 ROBO3Q96MS0 1386 aa7.46□□□□□ -1.22
CCDC6-203ENST00000518638 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-203ENST00000518638 VAMP4O75379 141 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 CLEC3AO75596 197 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 CIAO1O76071 339 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 NBPF7P0C2Y1 421 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-203ENST00000518638 RARBP10826 455 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 GLDCP23378 1020 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 CYP2C19P33261 490 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 ADCYAP1R1P41586 468 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 LINC00310P59036 64 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 TLE2Q04725 743 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 LRRC41Q15345 812 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 CDKAL1Q5VV42 579 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 RUFY4Q6ZNE9 571 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 THAP5Q7Z6K1 395 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 TMEM192Q8IY95 271 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 SLC44A5Q8NCS7 719 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 NUP133Q8WUM0 1156 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 CPLX3Q8WVH0 158 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 C12orf42Q96LP6 360 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 HSPA12BQ96MM6 686 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 SLC6A18Q96N87 628 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 KCNH6Q9H252 994 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 PRDM12Q9H4Q4 367 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 CARS2Q9HA77 564 aaKnown RBP7.45□□□□□ -1.22
CCDC6-203ENST00000518638 C19orf73Q9NVV2 129 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 FLRT1Q9NZU1 646 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 COG5Q9UP83 839 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 FANCIQ9NVI1 1328 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 PLXNA1Q9UIW2 1896 aa7.45□□□□□ -1.22
CCDC6-203ENST00000518638 H3BS24 57 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 ERC2O15083 957 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 LRRN2O75325 713 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 RHBDL3P58872 404 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 ANKRD33Q7Z3H0 272 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 FOXP4Q8IVH2 680 aaPredicted RBP7.44□□□□□ -1.22
CCDC6-203ENST00000518638 ABRAQ8N0Z2 381 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 CRACR2BQ8N4Y2 399 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms