RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
CSMD1-203ENST00000518151 USP36Q9P275 1121 aaKnown RBP6.32□□□□□ -1.4
CSMD1-203ENST00000518151 NCDNQ9UBB6 729 aa6.32□□□□□ -1.4
CSMD1-203ENST00000518151 PPFIA4O75335 1185 aa6.31□□□□□ -1.4
CSMD1-203ENST00000518151 GNAT2P19087 354 aa6.31□□□□□ -1.4
CSMD1-203ENST00000518151 TOB2Q14106 344 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-203ENST00000518151 LRRC32Q14392 662 aa6.31□□□□□ -1.4
CSMD1-203ENST00000518151 HTR3DQ70Z44 454 aa6.31□□□□□ -1.4
CSMD1-203ENST00000518151 LDLRAD3Q86YD5 345 aa6.31□□□□□ -1.4
CSMD1-203ENST00000518151 ULK2Q8IYT8 1036 aa6.31□□□□□ -1.4
CSMD1-203ENST00000518151 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
CSMD1-203ENST00000518151 XDHP47989 1333 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 TMEM191CA6NGB0 347 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 F2P00734 622 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 NEK4P51957 841 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 DCAF17Q5H9S7 520 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-203ENST00000518151 CREB3L3Q68CJ9 461 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-203ENST00000518151 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-203ENST00000518151 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 ST8SIA2Q92186 375 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 RTF1Q92541 710 aaKnown RBP6.3□□□□□ -1.4
CSMD1-203ENST00000518151 UBXN4Q92575 508 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 HAS1Q92839 578 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 MNTQ99583 582 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
CSMD1-203ENST00000518151 RAMP2O60895 175 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 ATP2A2P16615 1042 aaKnown RBP6.29□□□□□ -1.4
CSMD1-203ENST00000518151 POU3F2P20265 443 aaPredicted RBP6.29□□□□□ -1.4
CSMD1-203ENST00000518151 RABGGTBP53611 331 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 SLC25A3Q00325 362 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 OCRLQ01968 901 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 RABL3Q5HYI8 236 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 ESPNLQ6ZVH7 1005 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 UNC5BQ8IZJ1 945 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 SYNE4Q8N205 404 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 MB21D1Q8N884 522 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 SLC25A43Q8WUT9 341 aaPredicted RBP6.29□□□□□ -1.4
CSMD1-203ENST00000518151 DRC1Q96MC2 740 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 NRDE2Q9H7Z3 1164 aa6.29□□□□□ -1.4
CSMD1-203ENST00000518151 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-203ENST00000518151 KPNA6O60684 536 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 SART3Q15020 963 aaKnown RBP6.28□□□□□ -1.4
CSMD1-203ENST00000518151 CCDC144BQ3MJ40 725 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 NAIF1Q69YI7 327 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-203ENST00000518151 UNQ6494/PRO21346Q6UXR6 183 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 CDYL2Q8N8U2 506 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 FERMT2Q96AC1 680 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 KANSL2Q9H9L4 492 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 PCDHB6Q9Y5E3 794 aa6.28□□□□□ -1.4
CSMD1-203ENST00000518151 MYPNQ86TC9 1320 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 NRP2O60462 931 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 PPFIA2O75334 1257 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 RECQL4O94761 1208 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 PCDH8O95206 1070 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 GAAP10253 952 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 XPAP23025 273 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-203ENST00000518151 KPNA1P52294 538 aaPredicted RBP6.27□□□□□ -1.41
CSMD1-203ENST00000518151 DSG1Q02413 1049 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 CCDC178Q5BJE1 867 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 GPR158Q5T848 1215 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 ZNF627Q7L945 461 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 ZNF276Q8N554 614 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 PPP1R14CQ8TAE6 165 aa6.27□□□□□ -1.41
CSMD1-203ENST00000518151 A0A0A6YYK5 440 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-203ENST00000518151 FAM20BO75063 409 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 ALDH1A2O94788 518 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 GPR15P49685 360 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 METTL24Q5JXM2 366 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 C16orf86Q6ZW13 317 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 LRRTM3Q86VH5 581 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 PPM1KQ8N3J5 372 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 APPBP2Q92624 585 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 NINJ1Q92982 152 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 LENG9Q96B70 501 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 PGBD4Q96DM1 585 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 PDCD2LQ9BRP1 358 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 SOX7Q9BT81 388 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 EPC1Q9H2F5 836 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 THG1LQ9NWX6 298 aaKnown RBP6.26□□□□□ -1.41
CSMD1-203ENST00000518151 GPRC5BQ9NZH0 403 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 H2AFY2Q9P0M6 372 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-203ENST00000518151 TRPS1Q9UHF7 1281 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 CD2APQ9Y5K6 639 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 DMRT1Q9Y5R6 373 aa6.26□□□□□ -1.41
CSMD1-203ENST00000518151 RPS6KA4O75676 772 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 WNT3AP56704 352 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 NRG3P56975 720 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 AHI1Q8N157 1196 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 GLB1L3Q8NCI6 653 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-203ENST00000518151 CHTF18Q8WVB6 975 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 FAM193BQ96PV7 902 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-203ENST00000518151 TTPALQ9BTX7 342 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 MSRAQ9UJ68 235 aa6.25□□□□□ -1.41
CSMD1-203ENST00000518151 TRIM24O15164 1050 aa6.24□□□□□ -1.41
CSMD1-203ENST00000518151 FOXN1O15353 648 aa6.24□□□□□ -1.41
CSMD1-203ENST00000518151 HOXA3O43365 443 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms