RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 VPS52Q8N1B4 723 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GSTCDQ8NEC7 633 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PRPF31Q8WWY3 499 aaKnown RBP9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TMEM143Q96AN5 459 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RIPOR3Q96MK2 946 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CDCA3Q99618 268 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TRAIPQ9BWF2 469 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GLT8D2Q9H1C3 349 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NGRNQ9NPE2 291 aaKnown RBP9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NRBP2Q9NSY0 501 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 BMP2KQ9NSY1 1161 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SUCLA2Q9P2R7 463 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CACNG4Q9UBN1 327 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PCDHA4Q9UN74 947 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SAMM50Q9Y512 469 aa9.32□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZC3H11AO75152 810 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 LARGE1O95461 756 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 EOMESO95936 686 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 EDN1P05305 212 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CNPP09543 421 aaKnown RBP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TBC1D8BQ0IIM8 1120 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ST3GAL1Q11201 340 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 STK3Q13188 491 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 AMHR2Q16671 573 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 XKR3Q5GH77 459 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CWF19L1Q69YN2 538 aaKnown RBP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TMC5Q6UXY8 1006 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RUFY3Q7L099 469 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 MIER3Q7Z3K6 550 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RHPN2Q8IUC4 686 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DAGLBQ8NCG7 672 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TNPO1Q92973 898 aaKnown RBP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TNFRSF25Q93038 417 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 FAM167AQ96KS9 214 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 B3GALT6Q96L58 329 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 MAP7D2Q96T17 732 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 EIF2AQ9BY44 585 aaKnown RBP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 KCNH6Q9H252 994 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DHX33Q9H6R0 707 aaKnown RBP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 FAM105AQ9NUU6 356 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 INPP5FQ9Y2H2 1132 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 USP20Q9Y2K6 914 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 IRAK3Q9Y616 596 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PLXNA3P51805 1871 aa9.31□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NARSO43776 548 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 HMGB1P09429 215 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CTSAP10619 480 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZSCAN20P17040 1043 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 HOXB8P17481 243 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GNA11P29992 359 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NLRP5P59047 1200 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SCRN1Q12765 414 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SMC1AQ14683 1233 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NOMO2Q5JPE7 1267 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DDX53Q86TM3 631 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RNF168Q8IYW5 571 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 BLIDQ8IZY5 108 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RSAD2Q8WXG1 361 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RABGGTAQ92696 567 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 KLHL5Q96PQ7 755 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TEKT3Q9BXF9 490 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SH3GLB2Q9NR46 395 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CYP26B1Q9NR63 512 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TPCN1Q9ULQ1 816 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PIN4Q9Y237 131 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 HES2Q9Y543 173 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PCDHB2Q9Y5E7 798 aa9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 MYH9P35579 1960 aaKnown RBP9.3□□□□□ -0.92
SCARNA20.3-201ENST00000516913 COL4A3Q01955 1670 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DOCK6Q96HP0 2047 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 B4GALT5O43286 388 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RFPL2O75678 378 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SLITRK3O94933 977 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 POMCP01189 267 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SSBP05455 408 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SRGAP2CP0DJJ0 459 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SFNP31947 248 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CLCN4P51793 760 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 JAK3P52333 1124 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 LAMTOR4Q0VGL1 99 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NR5A1Q13285 461 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CTTNQ14247 550 aaKnown RBP9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 KIAA0319Q5VV43 1072 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GPR149Q86SP6 731 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 POTEDQ86YR6 584 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PPP2R3CQ969Q6 453 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZNF707Q96C28 371 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms