RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 RABGGTBP53611 331 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SLC25A3Q00325 362 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PABPC4Q13310 644 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 RABL3Q5HYI8 236 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CREB3L3Q68CJ9 461 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NAIF1Q69YI7 327 aaPredicted RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 APBB1IPQ7Z5R6 666 aaPredicted RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 UNC5BQ8IZJ1 945 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SYNE4Q8N205 404 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 EFHBQ8N7U6 833 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MB21D1Q8N884 522 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SLC25A43Q8WUT9 341 aaPredicted RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ATXN2LQ8WWM7 1075 aaKnown RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 HAS1Q92839 578 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZNF512Q96ME7 567 aaPredicted RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MNTQ99583 582 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NOL10Q9BSC4 688 aaKnown RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MYL10Q9BUA6 226 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZSWIM4Q9H7M6 989 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NRDE2Q9H7Z3 1164 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 IFT57Q9NWB7 429 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 OXSMQ9NWU1 459 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 USP36Q9P275 1121 aaKnown RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NCDNQ9UBB6 729 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ST20-MTHFSA0A0A6YYL1 179 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PPP1R12AO14974 1030 aaPredicted RBP3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 LRRC32Q14392 662 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TCEA2Q15560 299 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZNF627Q7L945 461 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ELOA2Q8IYF1 753 aaPredicted RBP3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 LENG9Q96B70 501 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 POFUT1Q9H488 388 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GPRC5BQ9NZH0 403 aa3.8□□□□□ -1.8
SCARNA16.2-201ENST00000516520 FOXN1O15353 648 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NRP2O60462 931 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 RPS6KA4O75676 772 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 F2P00734 622 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ATP2A2P16615 1042 aaKnown RBP3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 WNT3AP56704 352 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 OCRLQ01968 901 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 METTL24Q5JXM2 366 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ESPNLQ6ZVH7 1005 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZNF276Q8N554 614 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CDYL2Q8N8U2 506 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PPP1R14CQ8TAE6 165 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 RTF1Q92541 710 aaKnown RBP3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 FERMT2Q96AC1 680 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZG16BQ96DA0 208 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PDCD2LQ9BRP1 358 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TTPALQ9BTX7 342 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZMAT4Q9H898 229 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TRPS1Q9UHF7 1281 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PCDHB6Q9Y5E3 794 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 DMRT1Q9Y5R6 373 aa3.79□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MYPNQ86TC9 1320 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 A0A0A6YYK5 440 aaPredicted RBP3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TRIM24O15164 1050 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KPNA6O60684 536 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 FAM20BO75063 409 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 RECQL4O94761 1208 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ALDH1A2O94788 518 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 RHOBTB3O94955 611 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GAAP10253 952 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 POU3F2P20265 443 aaPredicted RBP3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 XPAP23025 273 aaPredicted RBP3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GPR15P49685 360 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NEK4P51957 841 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KPNA1P52294 538 aaPredicted RBP3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NANOS3P60323 173 aaKnown RBP3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 DSG1Q02413 1049 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CCDC178Q5BJE1 867 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 LY6G5CQ5SRR4 150 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GPR158Q5T848 1215 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 C1QL3Q5VWW1 255 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PCSK4Q6UW60 755 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MRGPREQ86SM8 312 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 HOMER1Q86YM7 354 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 DNAJC10Q8IXB1 793 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GLB1L3Q8NCI6 653 aaPredicted RBP3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 UBXN4Q92575 508 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PGBD4Q96DM1 585 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 AGAP2Q99490 1192 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SOX7Q9BT81 388 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 EPC1Q9H2F5 836 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 FZD1Q9UP38 647 aa3.78□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PCDH8O95206 1070 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 ITGB1P05556 798 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 GYPEP15421 78 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 KRT4P19013 534 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 NRG3P56975 720 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 SART3Q15020 963 aaKnown RBP3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 PTPAQ15257 358 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 LAIR1Q6GTX8 287 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 UNQ6494/PRO21346Q6UXR6 183 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 Q6ZPA2 131 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 LRRC55Q6ZSA7 311 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 C16orf86Q6ZW13 317 aa3.77□□□□□ -1.81
SCARNA16.2-201ENST00000516520 RHOUQ7L0Q8 258 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms