RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 CELA3BP08861 270 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 COL6A1P12109 1028 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 EDNRBP24530 442 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 POLD1P28340 1107 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 ETV4P43268 484 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 HTR3AP46098 478 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 FXR1P51114 621 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 AGFG1P52594 562 aaKnown RBP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 WNT3AP56704 352 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 GJA9P57773 515 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 FOXO4P98177 505 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 CD83Q01151 205 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 MORC3Q14149 939 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 GRM3Q14832 879 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 SAFBQ15424 915 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 ZNF827Q17R98 1081 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 PGS1Q32NB8 556 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 TRIM68Q6AZZ1 485 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 TMC5Q6UXY8 1006 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 GAREM2Q75VX8 874 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 CATIPQ7Z7H3 387 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 ZNF605Q86T29 641 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 DENND1CQ8IV53 801 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 REXO1L1PQ8IX06 675 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 KIAA0319LQ8IZA0 1049 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 MARCH10Q8NA82 808 aaPredicted RBP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 GLB1L3Q8NCI6 653 aaPredicted RBP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 GPR156Q8NFN8 814 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 CYFIP2Q96F07 1278 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 DYDC2Q96IM9 177 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 RPS6KC1Q96S38 1066 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 GORASP1Q9BQQ3 440 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 FDXACB1Q9BRP7 624 aaPredicted RBP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 MCOLN1Q9GZU1 580 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 BCAS3Q9H6U6 928 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 MSL2Q9HCI7 577 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 EPB41L4AQ9HCS5 686 aaPredicted RBP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 RIPOR2Q9Y4F9 1068 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 COMMD10Q9Y6G5 202 aa4.23□□□□□ -1.73
RNU6-390P-201ENST00000516259 FRMPD2Q68DX3 1309 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 RPTORQ8N122 1335 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 CARMIL2Q6F5E8 1435 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 PMS2P1A4D2B8 440 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 MTSS1O43312 755 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 FRS3O43559 492 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 ENDOD1O94919 500 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 ARIH2O95376 493 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 GASTP01350 101 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 LTA4HP09960 611 aaKnown RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 RHCEP18577 417 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 RPL17P18621 184 aaKnown RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 GLDCP23378 1020 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 USP14P54578 494 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 ZNF280AP59817 542 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 FAM193AP78312 1265 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 RHDQ02161 417 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 PPP3CAQ08209 521 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 OS9Q13438 667 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 TOP3AQ13472 1001 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 SLC4A10Q6U841 1118 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 MPZL3Q6UWV2 235 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 LMBR1LQ6UX01 489 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 TAS1R1Q7RTX1 841 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 TTC7BQ86TV6 843 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 FBXO15Q8NCQ5 510 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 MORC4Q8TE76 937 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 HOXB13Q92826 284 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 PMM1Q92871 262 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 FAM167AQ96KS9 214 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 WDR92Q96MX6 357 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 PSMD1Q99460 953 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 ADI1Q9BV57 179 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 KATNBL1Q9H079 304 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 MYH16Q9H6N6 1097 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 GCM1Q9NP62 436 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 DCP1AQ9NPI6 582 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 KMT5AQ9NQR1 393 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 RBPJLQ9UBG7 517 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 SERPINB13Q9UIV8 391 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 L1RE1Q9UN81 338 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 PLA2G2DQ9UNK4 145 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 LIMCH1Q9UPQ0 1083 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 DNM3Q9UQ16 869 aa4.22□□□□□ -1.73
RNU6-390P-201ENST00000516259 ARID4BQ4LE39 1312 aaPredicted RBP4.21□□□□□ -1.73
RNU6-390P-201ENST00000516259 SCO2A0A1W2PP80 73 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 CCDC154A6NI56 674 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 KLHL18O94889 574 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 LY86O95711 162 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 MED14OSP0DP75 135 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 ZNF28P17035 718 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 RPL13P26373 211 aaKnown RBP4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 CACNB3P54284 484 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 GPSM2P81274 684 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 CDK17Q00537 523 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 PICALMQ13492 652 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 GALEQ14376 348 aa4.21□□□□□ -1.74
RNU6-390P-201ENST00000516259 RTP5Q14D33 572 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms