RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 DNAJB3Q8WWF6 145 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 WNT8BQ93098 351 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 NLRP4Q96MN2 994 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 MAP7D2Q96T17 732 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 MCOLN1Q9GZU1 580 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 CCDC113Q9H0I3 377 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 FAM49AQ9H0Q0 323 aaPredicted RBP18.49■□□□□ 0.55
AP3S1-208ENST00000515066 TBX20Q9UMR3 447 aa18.49■□□□□ 0.55
AP3S1-208ENST00000515066 EDN1P05305 212 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 GJA8P48165 433 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 GPC3P51654 580 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 PTENP60484 403 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 PTPN11Q06124 597 aaPredicted RBP18.48■□□□□ 0.55
AP3S1-208ENST00000515066 FOXR2Q6PJQ5 311 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 DEPTORQ8TB45 409 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 HVCN1Q96D96 273 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 PPP1R16BQ96T49 567 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 NFKBIZQ9BYH8 718 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 KCNG1Q9UIX4 513 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 NFE2L3Q9Y4A8 694 aa18.48■□□□□ 0.55
AP3S1-208ENST00000515066 A0A0U1RQG5 324 aaPredicted RBP18.47■□□□□ 0.55
AP3S1-208ENST00000515066 GOLGA6L3A6NEY3 463 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 GPR32O75388 356 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 KIF20AO95235 890 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 LRRC63Q05C16 580 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 POU5F1BQ06416 359 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 SPATA1Q5VX52 437 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TAF2Q6P1X5 1199 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 IFNLR1Q8IU57 520 aaPredicted RBP18.47■□□□□ 0.55
AP3S1-208ENST00000515066 ADAMTS10Q9H324 1103 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 MINDY3Q9H8M7 445 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TRMT13Q9NUP7 481 aaKnown RBP18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TRAF3IP3Q9Y228 551 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 PHLPP2Q6ZVD8 1323 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 A0A087WZ62 844 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 BICDL2A1A5D9 508 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TISP43B9A030 160 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 H0YCG3 227 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 PDXKO00764 312 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 NLRP11P59045 1033 aaKnown RBP18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TMEM62Q0P6H9 643 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TFDP1Q14186 410 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 PTGISQ16647 500 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 ACCSQ96QU6 501 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 FDXACB1Q9BRP7 624 aaPredicted RBP18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TMEM134Q9H6X4 195 aa18.47■□□□□ 0.55
AP3S1-208ENST00000515066 TYW1Q9NV66 732 aaKnown RBP18.47■□□□□ 0.55
AP3S1-208ENST00000515066 BECN2A8MW95 431 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 ARVCFO00192 962 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 IQCF3P0C7M6 154 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 SCP2P22307 547 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 CDK7P50613 346 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 EFNA5P52803 228 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 MBTD1Q05BQ5 628 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 KIZQ2M2Z5 673 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 SLC39A4Q6P5W5 647 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 LRRC55Q6ZSA7 311 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 ZNF410Q86VK4 478 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 EEF2KMTQ96G04 330 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 GBP3Q9H0R5 595 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 SAMSN1Q9NSI8 373 aaKnown RBP18.46■□□□□ 0.55
AP3S1-208ENST00000515066 FANCLQ9NW38 375 aa18.46■□□□□ 0.55
AP3S1-208ENST00000515066 TTLL13PA6NNM8 815 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 K7ERI5 159 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 B4GALT4O60513 344 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
AP3S1-208ENST00000515066 ZNF18P17022 549 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 ABCD1P33897 745 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 RPAINQ86UA6 219 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 IRF2BP1Q8IU81 584 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 ZC3H3Q8IXZ2 948 aaKnown RBP18.45■□□□□ 0.54
AP3S1-208ENST00000515066 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
AP3S1-208ENST00000515066 DHX38Q92620 1227 aaKnown RBP18.45■□□□□ 0.54
AP3S1-208ENST00000515066 C2orf40Q9H1Z8 148 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 TMEM206Q9H813 350 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 GRPEL1Q9HAV7 217 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 CDHR5Q9HBB8 845 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 AGPAT3Q9NRZ7 376 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 USP20Q9Y2K6 914 aa18.45■□□□□ 0.54
AP3S1-208ENST00000515066 SMTNL1A8MU46 457 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 RBAK-RBAKDNI3L0D1 243 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 CSDE1O75534 798 aaKnown RBP18.44■□□□□ 0.54
AP3S1-208ENST00000515066 COL6A1P12109 1028 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 PHKA2P46019 1235 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 EDRF1Q3B7T1 1238 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 CDKAL1Q5VV42 579 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 ZBTB8OSQ8IWT0 167 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 CSGALNACT2Q8N6G5 542 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 FZD8Q9H461 694 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 ANKRD63C9JTQ0 380 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 PIGRP01833 764 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 ATP1A3P13637 1013 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 NFIL3Q16649 462 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 AMHR2Q16671 573 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 TRIM71Q2Q1W2 868 aaKnown RBP18.44■□□□□ 0.54
AP3S1-208ENST00000515066 HSP90AA4PQ58FG1 418 aa18.44■□□□□ 0.54
AP3S1-208ENST00000515066 SYCP3Q8IZU3 236 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms