RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CCND1P24385 295 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CCZ1BP86790 482 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CCZ1P86791 482 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 EFTUD2Q15029 972 aaKnown RBP eCLIP14.15□□□□□ -0.141e-10■■■■■ 73.3
TCOF1-214ENST00000515035 PPP6R3Q5H9R7 873 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CATSPER1Q8NEC5 780 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 KCNH2Q12809 1159 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 ZBED8Q8IZ13 594 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 LBHD1Q9BQE6 289 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 ASCC2Q9H1I8 757 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 DHX36Q9H2U1 1008 aaKnown RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 LRRC4Q9HBW1 653 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 POLD4Q9HCU8 107 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 TEKT2Q9UIF3 430 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SNX12Q9UMY4 172 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 ARHGAP26Q9UNA1 814 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 USP15Q9Y4E8 981 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 PDIA2Q13087 525 aaKnown RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 CIAPIN1Q6FI81 312 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 USP17L2Q6R6M4 530 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 ANGPTL8Q6UXH0 198 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 STAG2Q8N3U4 1231 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SNX25Q9H3E2 840 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 AGTP01019 485 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 TMED10P49755 219 aaKnown RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 CORO7P57737 925 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 NCAPHQ15003 741 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 TEX9Q8N6V9 391 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 DNAJC9Q8WXX5 260 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 CALR3Q96L12 384 aaKnown RBP14.14□□□□□ -0.15
TCOF1-214ENST00000515035 RMDN2Q96LZ7 410 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 COA1Q9GZY4 146 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 FAM8A1Q9UBU6 413 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 LSP1P33241 339 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SOX5P35711 763 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SERPINB4P48594 390 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 IRAK1P51617 712 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 KDSRQ06136 332 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SLC27A3Q5K4L6 730 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SCARA5Q6ZMJ2 495 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 ATP11CQ8NB49 1132 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 RNF217Q8TC41 542 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 SNF8Q96H20 258 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 TBC1D23Q9NUY8 699 aa14.14□□□□□ -0.15
TCOF1-214ENST00000515035 DEAF1O75398 565 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 ZNF18P17022 549 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 SERPINB3P29508 390 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 HNRNPH1P31943 449 aaKnown RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 AARSP49588 968 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■□□ 15.7
TCOF1-214ENST00000515035 ALCAMQ13740 583 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 DHX34Q14147 1143 aaKnown RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 UBE2SQ16763 222 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 SEC16BQ96JE7 1060 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 SLC13A1Q9BZW2 595 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 UBN1Q9NPG3 1134 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 BSDC1Q9NW68 430 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 PIM2Q9P1W9 311 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CHN1P15882 459 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 FGFR4P22455 802 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 MRPS35P82673 323 aaKnown RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 GPS1Q13098 491 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 KCTD2Q14681 263 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 LRRC36Q1X8D7 754 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 OLFML2BQ68BL8 750 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 OR9Q1Q8NGQ5 310 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 ZNF564Q8TBZ8 553 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CYFIP2Q96F07 1278 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 PLEKHA8P1O95397 391 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CAPRIN1Q14444 709 aaKnown RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CCNI2Q6ZMN8 369 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 PIK3R5Q8WYR1 880 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 NAF1Q96HR8 494 aaKnown RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
TCOF1-214ENST00000515035 SLC13A4Q9UKG4 626 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 A0A1W2PQC6 194 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 USP17L4A6NCW7 530 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 SUSD4Q5VX71 490 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 USP17L1Q7RTZ2 530 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CERKQ8TCT0 537 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 DPF2Q92785 391 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 SENP1Q9P0U3 644 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 HPCAL4Q9UM19 191 aa14.13□□□□□ -0.15
TCOF1-214ENST00000515035 CDC42BPAQ5VT25 1732 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 OSBPP22059 807 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 MAP4P27816 1152 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 ABCD1P33897 745 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SERPINB10P48595 397 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SCG3Q8WXD2 468 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms