RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 DNAJB1P25685 340 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 RAB27AP51159 221 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 KCNQ1P51787 676 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 KRT17Q04695 432 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 CUL4AQ13619 759 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 CAMK1Q14012 370 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 PCBP1Q15365 356 aaKnown RBP eCLIP12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 IL17AQ16552 155 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 ECM1Q16610 540 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 CLLU1OSQ5K130 101 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 KCNT2Q6UVM3 1135 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 IGSF22Q8N9C0 903 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 COLGALT1Q8NBJ5 622 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 HELQQ8TDG4 1101 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 ASAP3Q8TDY4 903 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 LPPQ93052 612 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 IGFLR1Q9H665 355 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 AGPAT5Q9NUQ2 364 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
ARHGEF28-213ENST00000513841 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 OFD1O75665 1012 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 CSPG5O95196 566 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 KCNA5P22460 613 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 CDC25AP30304 524 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 AXLP30530 894 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 PRPHP41219 470 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 ALDH7A1P49419 539 aaKnown RBP12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 UBE3AQ05086 875 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 GLB1LQ6UWU2 654 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 PPP2R3CQ969Q6 453 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 ZNF558Q96NG5 402 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 BHMT2Q9H2M3 363 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 UBE2ZQ9H832 354 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 POLD4Q9HCU8 107 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 HCSTQ9UBK5 93 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
ARHGEF28-213ENST00000513841 PDCP20941 246 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 PLCB3Q01970 1234 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 CAPSQ13938 189 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 ZRSR1Q15695 479 aaKnown RBP12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 LEXMQ3ZCV2 418 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 UBXN11Q5T124 520 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 RSPH1Q8WYR4 309 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 MRPL9Q9BYD2 267 aaKnown RBP12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 NFKBIZQ9BYH8 718 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 SPG21Q9NZD8 308 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 COL4A6Q14031 1691 aa12.83□□□□□ -0.36
ARHGEF28-213ENST00000513841 LRRIQ4A6NIV6 560 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 MEIS3P2A8K0S8 358 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 E9PMD0 336 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 TSPAN1O60635 241 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 ALDH2P05091 517 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 ITGA4P13612 1032 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 IRS1P35568 1242 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 ERVFC1P60507 584 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 RNASELQ05823 741 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 HYAL1Q12794 435 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 NOMO2Q5JPE7 1267 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 PDE12Q6L8Q7 609 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 AGMOQ6ZNB7 445 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 BRAPQ7Z569 592 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 RBM23Q86U06 439 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 MRPS27Q92552 414 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 CPB2Q96IY4 423 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 CSRNP2Q9H175 543 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 TLE6Q9H808 572 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 UBN1Q9NPG3 1134 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 KANSL3Q9P2N6 904 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 LZTS1Q9Y250 596 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 INPP5FQ9Y2H2 1132 aa12.82□□□□□ -0.36
ARHGEF28-213ENST00000513841 TTC28Q96AY4 2481 aa12.81□□□□□ -0.36
ARHGEF28-213ENST00000513841 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
ARHGEF28-213ENST00000513841 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF28-213ENST00000513841 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
ARHGEF28-213ENST00000513841 NT5C1B-RDH14C9J2C7 533 aa12.81□□□□□ -0.36
ARHGEF28-213ENST00000513841 H3BQ06 376 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms