RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 NEK8Q86SG6 692 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 LRRC71Q8N4P6 559 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.03□□□□□ -0.64
CCL28-203ENST00000513525 WASF1Q92558 559 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 PPP1R16BQ96T49 567 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 NAP1L4Q99733 375 aaKnown RBP11.03□□□□□ -0.64
CCL28-203ENST00000513525 TMEM161AQ9NX61 479 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 PLAGL2Q9UPG8 496 aa11.03□□□□□ -0.64
CCL28-203ENST00000513525 IGKV6-21A0A0C4DH24 114 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 TBX3O15119 743 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 ITGB1P05556 798 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 GATMP50440 423 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 CDC42EP1Q00587 391 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 CAMK1Q14012 370 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 CTC1Q2NKJ3 1217 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 LETM2Q2VYF4 491 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 PAN2Q504Q3 1202 aaKnown RBP11.02□□□□□ -0.65
CCL28-203ENST00000513525 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 SCAND2PQ9GZW5 306 aaPredicted RBP11.02□□□□□ -0.65
CCL28-203ENST00000513525 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 ALG13Q9NP73 1137 aaKnown RBP11.02□□□□□ -0.65
CCL28-203ENST00000513525 ORC3Q9UBD5 711 aaPredicted RBP11.02□□□□□ -0.65
CCL28-203ENST00000513525 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
CCL28-203ENST00000513525 VAV3Q9UKW4 847 aa11.02□□□□□ -0.65
CCL28-203ENST00000513525 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 H3BQV1 296 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 DKC1O60832 514 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCL28-203ENST00000513525 FDPSP14324 419 aaKnown RBP11.01□□□□□ -0.65
CCL28-203ENST00000513525 DARSP14868 501 aaKnown RBP11.01□□□□□ -0.65
CCL28-203ENST00000513525 PSMC5P62195 406 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 DNM1Q05193 864 aaKnown RBP11.01□□□□□ -0.65
CCL28-203ENST00000513525 MTERF2Q49AM1 385 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 ATL3Q6DD88 541 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 PTCRAQ6ISU1 281 aaPredicted RBP11.01□□□□□ -0.65
CCL28-203ENST00000513525 FAM178BQ8IXR5 827 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 KLHL23Q8NBE8 558 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 SPPL3Q8TCT6 385 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 GJB4Q9NTQ9 266 aa11.01□□□□□ -0.65
CCL28-203ENST00000513525 EML1O00423 815 aa11□□□□□ -0.65
CCL28-203ENST00000513525 HOXA2O43364 376 aa11□□□□□ -0.65
CCL28-203ENST00000513525 CCNT1O60563 726 aaKnown RBP11□□□□□ -0.65
CCL28-203ENST00000513525 MAFO75444 373 aaPredicted RBP11□□□□□ -0.65
CCL28-203ENST00000513525 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
CCL28-203ENST00000513525 XRCC6P12956 609 aaKnown RBP eCLIP11□□□□□ -0.65
CCL28-203ENST00000513525 IL9P15248 144 aa11□□□□□ -0.65
CCL28-203ENST00000513525 ZSCAN20P17040 1043 aaPredicted RBP11□□□□□ -0.65
CCL28-203ENST00000513525 DNAJB1P25685 340 aa11□□□□□ -0.65
CCL28-203ENST00000513525 LTBRP36941 435 aa11□□□□□ -0.65
CCL28-203ENST00000513525 QARSP47897 775 aaKnown RBP11□□□□□ -0.65
CCL28-203ENST00000513525 DNM2P50570 870 aa11□□□□□ -0.65
CCL28-203ENST00000513525 UBE3AQ05086 875 aa11□□□□□ -0.65
CCL28-203ENST00000513525 HYAL1Q12794 435 aa11□□□□□ -0.65
CCL28-203ENST00000513525 RESTQ13127 1097 aa11□□□□□ -0.65
CCL28-203ENST00000513525 FAM102BQ5T8I3 360 aa11□□□□□ -0.65
CCL28-203ENST00000513525 PIK3AP1Q6ZUJ8 805 aa11□□□□□ -0.65
CCL28-203ENST00000513525 ANO5Q75V66 913 aa11□□□□□ -0.65
CCL28-203ENST00000513525 HAS1Q92839 578 aa11□□□□□ -0.65
CCL28-203ENST00000513525 TNFRSF25Q93038 417 aa11□□□□□ -0.65
CCL28-203ENST00000513525 PPP2R3CQ969Q6 453 aa11□□□□□ -0.65
CCL28-203ENST00000513525 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
CCL28-203ENST00000513525 JPH2Q9BR39 696 aaPredicted RBP11□□□□□ -0.65
CCL28-203ENST00000513525 ATP6V0A4Q9HBG4 840 aa11□□□□□ -0.65
CCL28-203ENST00000513525 BRMS1Q9HCU9 246 aa11□□□□□ -0.65
CCL28-203ENST00000513525 AAASQ9NRG9 546 aa11□□□□□ -0.65
CCL28-203ENST00000513525 CLDND1Q9NY35 253 aa11□□□□□ -0.65
CCL28-203ENST00000513525 PPME1Q9Y570 386 aa11□□□□□ -0.65
CCL28-203ENST00000513525 PCDHB12Q9Y5F1 795 aa11□□□□□ -0.65
CCL28-203ENST00000513525 PCDHGA10Q9Y5H3 936 aa11□□□□□ -0.65
CCL28-203ENST00000513525 TMEM150BA6NC51 233 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 TBKBP1A7MCY6 615 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 GFRA3O60609 400 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 P4HBP07237 508 aaKnown RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 COL9A1P20849 921 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 KRT2P35908 639 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 DRP2Q13474 957 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 FOXD4L6Q3SYB3 417 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 EARS2Q5JPH6 523 aaKnown RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 FOXD4L3Q6VB84 417 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 ZNF410Q86VK4 478 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 GAS2L3Q86XJ1 694 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 POF1BQ8WVV4 589 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 TRAIPQ9BWF2 469 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 C1QTNF1Q9BXJ1 281 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 TMEM117Q9H0C3 514 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 CWH43Q9H720 699 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 GDPD2Q9HCC8 539 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 CYP26B1Q9NR63 512 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 RNF19AQ9NV58 838 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 TMEM63CQ9P1W3 806 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 FAM50BQ9Y247 325 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 A0A0U1RQF3 1178 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 EOMESO95936 686 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 FGFR1P11362 822 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 LAG3P18627 525 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms