RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HTATSF1O43719 755 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 NARSO43776 548 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 NTSR2O95665 410 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 MCM4P33991 863 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 PIP4K2AP48426 406 aaPredicted RBP4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 SEPHS1P49903 392 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 INHBCP55103 352 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 SP3Q02447 781 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 GRAPQ13588 217 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 CR1LQ2VPA4 569 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 KIF6Q6ZMV9 814 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 ARMC9Q7Z3E5 817 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 GRAPLQ8TC17 118 aaPredicted RBP4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 EDAQ92838 391 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 RNF34Q969K3 372 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 FAM161BQ96MY7 647 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 HTATIP2Q9BUP3 242 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 UTP14AQ9BVJ6 771 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 TRIM8Q9BZR9 551 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 R3HDMLQ9H3Y0 253 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 GGA3Q9NZ52 723 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 ADAMTS1Q9UHI8 967 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 KNSTRNQ9Y448 316 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 MKI67P46013 3256 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 ANKRD36CQ5JPF3 1778 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 KDM3BQ7LBC6 1761 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 NPHP3-ACAD11A0A0J9YXS1 232 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 CBFA2T2O43439 604 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 ZNF202O95125 648 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 FUCA1P04066 466 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 PRMT2P55345 433 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 NKX3-2P78367 333 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 NFATC3Q12968 1075 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 GRB10Q13322 594 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 TAF7Q15545 349 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 SLC4A8Q2Y0W8 1093 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 HSP90AB3PQ58FF7 597 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 STK32CQ86UX6 486 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 RIOX2Q8IUF8 465 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 DPF3Q92784 378 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 NKD1Q969G9 470 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 NAF1Q96HR8 494 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 PTPN18Q99952 460 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 MYOZ2Q9NPC6 264 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 ZNF214Q9UL59 606 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 ZFR2Q9UPR6 939 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 STXBP5LQ9Y2K9 1186 aa4.8□□□□□ -1.64
PDLIM5-218ENST00000513341 UBN2Q6ZU65 1347 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 ECE2O60344 883 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 B4GALT4O60513 344 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 GPTP24298 496 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 SLC9C1Q4G0N8 1177 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 IGFL4Q6B9Z1 124 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 MOB2Q70IA6 237 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 CPNE8Q86YQ8 564 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 RBBP8NLQ8NC74 664 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 PNISRQ8TF01 805 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 RTF1Q92541 710 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 CLIC6Q96NY7 704 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 GMLQ99445 158 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 MMP19Q99542 508 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 DBNDD1Q9H9R9 158 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 BARX1Q9HBU1 254 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 VTI1BQ9UEU0 232 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 ADAM29Q9UKF5 820 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 COL6A3P12111 3177 aa4.79□□□□□ -1.64
PDLIM5-218ENST00000513341 RTL9Q8NET4 1388 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 DDX60Q8IY21 1712 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 A0A087X1B8 175 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 STXBP3O00186 592 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 PPFIA2O75334 1257 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 WDHD1O75717 1129 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 MLLT6P55198 1093 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 SF3B3Q15393 1217 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 FBXO33Q7Z6M2 555 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 TBC1D16Q8TBP0 767 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 CD99L2Q8TCZ2 262 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 ZCCHC14Q8WYQ9 949 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 DLL4Q9NR61 685 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 FTSJ1Q9UET6 329 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 POLLQ9UGP5 575 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 RRP7AQ9Y3A4 280 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 RANBP2P49792 3224 aaKnown RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 ZNF646O15015 1829 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 LAMB1P07942 1786 aa4.78□□□□□ -1.64
PDLIM5-218ENST00000513341 ASTN2O75129 1339 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 SH3TC1Q8TE82 1336 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 MYO3BQ8WXR4 1341 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 WNT10BO00744 389 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 CNOT4O95628 575 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 TP53P04637 393 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 GJB1P08034 283 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 RPS8P62241 208 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 PTH1RQ03431 593 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 CRHR2Q13324 411 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 PPP2R5DQ14738 602 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms