RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 SLC9A2Q9UBY0 812 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 SQORQ9Y6N5 450 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 CCDC196A0A1B0GTZ2 297 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.18□□□□□ -1.1
USP46-208ENST00000512656 DCDC2BA2VCK2 349 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 ZBTB43O43298 467 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 ATP9BO43861 1147 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 CHRNA1P02708 482 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 ITGB2P05107 769 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 HMGB1P09429 215 aaKnown RBP8.18□□□□□ -1.1
USP46-208ENST00000512656 INSRRP14616 1297 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 KCNA5P22460 613 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 CTNNB1P35222 781 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 ZNF76P36508 570 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 SLC26A2P50443 739 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 ADCY7P51828 1080 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 RCAN1P53805 252 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 IGBP1P78318 339 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 MRPS6P82932 125 aaKnown RBP8.18□□□□□ -1.1
USP46-208ENST00000512656 LPIN1Q14693 890 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 RTN1Q16799 776 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 CEP55Q53EZ4 464 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 MCTP2Q6DN12 878 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 APOA5Q6Q788 366 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 RUFY4Q6ZNE9 571 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 TSHZ1Q6ZSZ6 1077 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 DHX32Q7L7V1 743 aaKnown RBP8.18□□□□□ -1.1
USP46-208ENST00000512656 RAB11FIP4Q86YS3 637 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 C11orf84Q9BUA3 381 aaPredicted RBP8.18□□□□□ -1.1
USP46-208ENST00000512656 FTHL17Q9BXU8 183 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 LMAN2LQ9H0V9 348 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 KCNH7Q9NS40 1196 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 MARK1Q9P0L2 795 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 CDY2AQ9Y6F7 541 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 TCF20Q9UGU0 1960 aaKnown RBP8.18□□□□□ -1.1
USP46-208ENST00000512656 NFASCO94856 1347 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 COL4A6Q14031 1691 aa8.18□□□□□ -1.1
USP46-208ENST00000512656 PTPRSQ13332 1948 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 MICAL3Q7RTP6 2002 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 SMCO2A6NFE2 343 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 GOLGA8AA7E2F4 631 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 POM121CA8CG34 1229 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 GOLGA8BA8MQT2 603 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 ENPP3O14638 875 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 STAG3L1P0CL83 205 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 CD33P20138 364 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 BMPR1AP36894 532 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 DGKGP49619 791 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 STAT5BP51692 787 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 ACTR2P61160 394 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 FGD1P98174 961 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 EXOSC10Q01780 885 aaKnown RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 MGAT3Q09327 533 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 AP3B2Q13367 1082 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 BTG3Q14201 252 aaPredicted RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 TMEM31Q5JXX7 168 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 FBXO47Q5MNV8 452 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 MARCH8Q5T0T0 291 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 CENPQQ7L2Z9 268 aaPredicted RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 NIPA1Q7RTP0 329 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 PLPPR4Q7Z2D5 763 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 NME8Q8N427 588 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 DNAJB3Q8WWF6 145 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 PPP2R3CQ969Q6 453 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 PABPC5Q96DU9 382 aaKnown RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 ANO3Q9BYT9 981 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 FAM49AQ9H0Q0 323 aaPredicted RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 NSUN3Q9H649 340 aaKnown RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 BARHL2Q9NY43 387 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 NOP53Q9NZM5 478 aaKnown RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 HCN4Q9Y3Q4 1203 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 TELO2Q9Y4R8 837 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 PCDHA2Q9Y5H9 948 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 TRPV2Q9Y5S1 764 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 ADGRA3Q8IWK6 1321 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 COL4A4P53420 1690 aaPredicted RBP8.17□□□□□ -1.1
USP46-208ENST00000512656 SIP14410 1827 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 KAT6AQ92794 2004 aa8.17□□□□□ -1.1
USP46-208ENST00000512656 KLF18A0A0U1RQI7 1052 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 SMIM35A0A1B0GVV1 85 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 C5orf67F2Z3F1 127 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 MEIS1O00470 390 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 CDC45O75419 566 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 PROCP04070 461 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 CD52P31358 61 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 SREBF1P36956 1147 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 TXLNAP40222 546 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 PSMA6P60900 246 aaKnown RBP8.16□□□□□ -1.1
USP46-208ENST00000512656 PLCB4Q15147 1175 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 TCEAL5Q5H9L2 206 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 ODR4Q5SWX8 454 aa8.16□□□□□ -1.1
USP46-208ENST00000512656 FAM160B1Q5W0V3 765 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms