RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PI4K2BG5E9Z4 385 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 GALR2O43603 387 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 FMO6PO60774 539 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 FGFR1OPO95684 399 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 IL2RAP01589 272 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 EPHX1P07099 455 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCNCP24863 283 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 HSPA7P48741 367 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARSIQ5FYB1 569 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCDC183Q5T5S1 534 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 TDRD10Q5VZ19 366 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 OVOS1Q6IE37 1185 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 MTFR2Q6P444 385 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 MEX3BQ6ZN04 569 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARHGAP27Q6ZUM4 889 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 RPAP2Q8IXW5 612 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SPC24Q8NBT2 197 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SPATA17Q96L03 361 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 AK8Q96MA6 479 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 MFSD14AQ96MC6 490 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 COG8Q96MW5 612 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 TTPALQ9BTX7 342 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 BRIP1Q9BX63 1249 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CARD11Q9BXL7 1154 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 ANKRD2Q9GZV1 360 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 HPS4Q9NQG7 708 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 TUBD1Q9UJT1 453 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 HPCAL4Q9UM19 191 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 SNX13Q9Y5W8 968 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 AKNAQ7Z591 1439 aa6.93□□□□□ -1.3
TRAPPC11-209ENST00000512476 CDC42BPBQ9Y5S2 1711 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 FGF18O76093 207 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 EPN2O95208 641 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 KCNH1O95259 989 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 TNFRSF6BO95407 300 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ADCY5O95622 1261 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 MLYCDO95822 493 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 PSMC6P62333 389 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF543Q08ER8 600 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 MPEG1Q2M385 716 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 PGBD2Q6P3X8 592 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 KCNV1Q6PIU1 500 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 APOA5Q6Q788 366 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 RNF152Q8N8N0 203 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZMIZ2Q8NF64 920 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 TRIM47Q96LD4 638 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CNPPD1Q9BV87 410 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 EPN3Q9H201 632 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCM2LQ9NUG4 571 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARHGAP26Q9UNA1 814 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CEP83Q9Y592 693 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 WDR7Q9Y4E6 1490 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 NAIPQ13075 1403 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 FAM234BA2RU67 622 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 H0YC42 278 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 SIN3BO75182 1162 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 DXOO77932 396 aaKnown RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 TUBB4AP04350 444 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ATP5BP06576 529 aaKnown RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 SELPP16109 830 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 TECP42680 631 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 IDH3AP50213 366 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 DNM2P50570 870 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 TKTL1P51854 596 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 HIRAP54198 1017 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCNA1P78396 465 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CUL4AQ13619 759 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 DENND1CQ8IV53 801 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 SEPT12Q8IYM1 358 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 TMEM40Q8WWA1 233 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF764Q96H86 408 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 PPP1R13BQ96KQ4 1090 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 FGD4Q96M96 766 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CNTNAP3BQ96NU0 1288 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 NEK1Q96PY6 1258 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 CNTNAP3Q9BZ76 1288 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 PAIP1Q9H074 479 aaKnown RBP6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 KCND1Q9NSA2 647 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 LRP2BPQ9P2M1 347 aa6.92□□□□□ -1.3
TRAPPC11-209ENST00000512476 GCC2Q8IWJ2 1684 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 SYNJ2BP-COX16A0A087WUM0 186 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 RGSL1A5PLK6 1076 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 KRT87PA6NCN2 255 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 M0QX08 132 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 KIF2AO00139 706 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CBX4O00257 560 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CASQ2O14958 399 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 TPM3P06753 285 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 ADAM15Q13444 863 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 EFR3AQ14156 821 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 SSPNQ14714 243 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 PREPLQ4J6C6 727 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 DNTTIP2Q5QJE6 756 aaKnown RBP6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 SYNE3Q6ZMZ3 975 aa6.91□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCDC186Q7Z3E2 898 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms