RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MYBP10242 640 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 KLRC2P26717 231 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 TMOD1P28289 359 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 POTEGQ6S5H5 508 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 TEX2Q8IWB9 1127 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 SLC44A3Q8N4M1 653 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 FAM167AQ96KS9 214 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 SCLT1Q96NL6 688 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 CEP89Q96ST8 783 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 TRAIPQ9BWF2 469 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 SEMA4AQ9H3S1 761 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 TMEM150BA6NC51 233 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 STK25O00506 426 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 TARBP2Q15633 366 aaKnown RBP21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 SPECC1Q5M775 1068 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 C15orf39Q6ZRI6 1047 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 ST13P5Q8NFI4 369 aaPredicted RBP21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 TCEANC2Q96MN5 208 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 CNTNAP3BQ96NU0 1288 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 CNTNAP3Q9BZ76 1288 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 DLL3Q9NYJ7 618 aa21.48■■□□□ 1.03
HMGCS1-206ENST00000511774 A0A087WZ62 844 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 POTEMA6NI47 508 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 SP9P0CG40 484 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 GLULP15104 373 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 CDC27P30260 824 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 PUM1Q14671 1186 aaKnown RBP eCLIP21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 PRR16Q569H4 304 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 TWF2Q6IBS0 349 aaKnown RBP21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 TAS1R1Q7RTX1 841 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 GJA10Q969M2 543 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 SH2D3AQ9BRG2 576 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 FDXACB1Q9BRP7 624 aaPredicted RBP21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 MAN1C1Q9NR34 630 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 CHST12Q9NRB3 414 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 SAMM50Q9Y512 469 aa21.47■■□□□ 1.03
HMGCS1-206ENST00000511774 SPDYE4A6NLX3 237 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 RFPL2O75678 378 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 GBP2P32456 591 aaPredicted RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 CREB3L3Q68CJ9 461 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 GLB1LQ6UWU2 654 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 AGMOQ6ZNB7 445 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 MAML2Q8IZL2 1156 aaPredicted RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 ZNF710Q8N1W2 664 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 SUMF1Q8NBK3 374 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 CMASQ8NFW8 434 aaPredicted RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 GPR152Q8TDT2 470 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 WDR6Q9NNW5 1121 aaKnown RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 FAM105AQ9NUU6 356 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 RBM28Q9NW13 759 aaKnown RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 EPS15L1Q9UBC2 864 aa21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 PIN4Q9Y237 131 aaKnown RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 MTCL1Q9Y4B5 1905 aaKnown RBP21.46■■□□□ 1.03
HMGCS1-206ENST00000511774 CCDC195A0A1B0GUA6 201 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 hCG_1984214I3L0E3 225 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 LRRN2O75325 713 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 STBD1O95210 358 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 SETQ01105 290 aaPredicted RBP21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 RNASELQ05823 741 aaKnown RBP21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 TBC1D8BQ0IIM8 1120 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 NECTIN1Q15223 517 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 RTN1Q16799 776 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 ZNF713Q8N859 430 aaPredicted RBP21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 ZNF707Q96C28 371 aaPredicted RBP21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 EMILIN2Q9BXX0 1053 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 GCOM2Q9BZD3 368 aaPredicted RBP21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 DISC1Q9NRI5 854 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 NRBP2Q9NSY0 501 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 CLUHO75153 1309 aa21.45■■□□□ 1.02
HMGCS1-206ENST00000511774 WDR64B1ANS9 1081 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 C2CD2LO14523 706 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 ZNF623O75123 536 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 SRFP11831 508 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 KSR1Q8IVT5 923 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 FOXQ1Q9C009 403 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 MARCH5Q9NX47 278 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 MIA3Q5JRA6 1907 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 MYH15Q9Y2K3 1946 aa21.44■■□□□ 1.02
HMGCS1-206ENST00000511774 CHD6Q8TD26 2715 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 IGKV6-21A0A0C4DH24 114 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 INPPL1O15357 1258 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 MSH4O15457 936 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 TEX28O15482 410 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 CIITAP33076 1130 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 RSPO4Q2I0M5 234 aaPredicted RBP21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 C1orf210Q8IVY1 113 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 RUBCNQ92622 972 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 HINFPQ9BQA5 517 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 GLT8D2Q9H1C3 349 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 UNC45AQ9H3U1 944 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 TCEAL9Q9UHQ7 104 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 CFAP47Q6ZTR5 3102 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 PATJQ8NI35 1801 aa21.43■■□□□ 1.02
HMGCS1-206ENST00000511774 USP24Q9UPU5 2620 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 F8W810 466 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 CHMP2AO43633 222 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 EFEMP2O95967 443 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 SPATA31D3P0C874 917 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 EXOSC10Q01780 885 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms