RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 SMAP1Q8IYB5 467 aaPredicted RBP10.98□□□□□ -0.65
PTPN20-225ENST00000511769 RDM1Q8NG50 284 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 PPP1R13LQ8WUF5 828 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 RUBCNQ92622 972 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 SMARCE1Q969G3 411 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 DYDC2Q96IM9 177 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 PNMA5Q96PV4 448 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 MFSD1Q9H3U5 465 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 MLXIPQ9HAP2 919 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 JPH1Q9HDC5 661 aaPredicted RBP10.98□□□□□ -0.65
PTPN20-225ENST00000511769 VTA1Q9NP79 307 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 SLC9A2Q9UBY0 812 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 GNEQ9Y223 722 aaKnown RBP10.98□□□□□ -0.65
PTPN20-225ENST00000511769 USP15Q9Y4E8 981 aaPredicted RBP10.98□□□□□ -0.65
PTPN20-225ENST00000511769 R4GN57 208 aa10.98□□□□□ -0.65
PTPN20-225ENST00000511769 ABHD14A-ACY1A0A1B0GW23 586 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 DCDC2BA2VCK2 349 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 RBAK-RBAKDNI3L0D1 243 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 MED24O75448 989 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 SLITRK3O94933 977 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 P4HBP07237 508 aaKnown RBP10.97□□□□□ -0.65
PTPN20-225ENST00000511769 PSAPP07602 524 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 SDHBP21912 280 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 CYP4A11Q02928 519 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 PNOCQ13519 176 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 DHX8Q14562 1220 aaKnown RBP10.97□□□□□ -0.65
PTPN20-225ENST00000511769 TMEM119Q4V9L6 283 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 MIS18BP1Q6P0N0 1132 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 B3GNT9Q6UX72 402 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 CYFIP1Q7L576 1253 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 TMEM192Q8IY95 271 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 SMRP1Q8NCR6 262 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 SCFD2Q8WU76 684 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 LARP4BQ92615 738 aaKnown RBP10.97□□□□□ -0.65
PTPN20-225ENST00000511769 RAD54LQ92698 747 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 CCDC47Q96A33 483 aaKnown RBP10.97□□□□□ -0.65
PTPN20-225ENST00000511769 NACC1Q96RE7 527 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 HSD17B14Q9BPX1 270 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 KATNBL1Q9H079 304 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 TSPY26PQ9H489 355 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 RGL1Q9NZL6 768 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 DDX41Q9UJV9 622 aaKnown RBP10.97□□□□□ -0.65
PTPN20-225ENST00000511769 NOD1Q9Y239 953 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 LCTP09848 1927 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 ZNF292O60281 2723 aa10.97□□□□□ -0.65
PTPN20-225ENST00000511769 SSBP05455 408 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTPN20-225ENST00000511769 SPATA31C1P0DKV0 1188 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 TXNP10599 105 aaKnown RBP10.96□□□□□ -0.65
PTPN20-225ENST00000511769 QARSP47897 775 aaKnown RBP10.96□□□□□ -0.65
PTPN20-225ENST00000511769 SP2Q02086 613 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 ADAM15Q13444 863 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.65
PTPN20-225ENST00000511769 GPNMBQ14956 572 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 LY6KQ17RY6 165 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 NAALADL2Q58DX5 795 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 FBXO16Q8IX29 292 aaPredicted RBP10.96□□□□□ -0.65
PTPN20-225ENST00000511769 DHX37Q8IY37 1157 aaKnown RBP10.96□□□□□ -0.65
PTPN20-225ENST00000511769 GRAMD1CQ8IYS0 662 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 KREMEN2Q8NCW0 462 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 STAMQ92783 540 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 ZSWIM4Q9H7M6 989 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 KBTBD4Q9NVX7 518 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 ANO10Q9NW15 660 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 RMND1Q9NWS8 449 aa10.96□□□□□ -0.65
PTPN20-225ENST00000511769 ATG2AQ2TAZ0 1938 aa10.96□□□□□ -0.66
PTPN20-225ENST00000511769 E9PMD0 336 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 NOP56O00567 594 aaKnown RBP10.95□□□□□ -0.66
PTPN20-225ENST00000511769 SORBS3O60504 671 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 EFCAB14O75071 495 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 GGPS1O95749 300 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 KRT18P05783 430 aaKnown RBP10.95□□□□□ -0.66
PTPN20-225ENST00000511769 PLA2G4BP0C869 781 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 SMPD1P17405 629 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 ACTR2P61160 394 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 PSMC5P62195 406 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 HTRA4P83105 476 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-225ENST00000511769 SP4Q02446 784 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 TYRO3Q06418 890 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 IKBKEQ14164 716 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 MCM6Q14566 821 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 ECM1Q16610 540 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 STX1AQ16623 288 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 IQSEC1Q6DN90 963 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 METTL7BQ6UX53 244 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPN20-225ENST00000511769 MYOCDQ8IZQ8 938 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 ERCC4Q92889 916 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-225ENST00000511769 ATP6V0A1Q93050 837 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 GSDMAQ96QA5 445 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 C7orf25Q9BPX7 421 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 BLZF1Q9H2G9 400 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 BLOC1S4Q9NUP1 217 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 CLEC1BQ9P126 229 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 TUBE1Q9UJT0 475 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 CDV3Q9UKY7 258 aaKnown RBP10.95□□□□□ -0.66
PTPN20-225ENST00000511769 PCDHA5Q9Y5H7 936 aa10.95□□□□□ -0.66
PTPN20-225ENST00000511769 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms