RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 ZDHHC9Q9Y397 364 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 ABCA3Q99758 1704 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 ARHGEF5Q12774 1597 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 GCC2Q8IWJ2 1684 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 COL14A1Q05707 1796 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 TNS3Q68CZ2 1445 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 GSG1L2A8MUP6 293 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 PATE3B3GLJ2 98 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 ZNF561-AS1K7EIQ3 104 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 CYR61O00622 381 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 PDE8AO60658 829 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 GLRX3O76003 335 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 AMY2AP04746 511 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 MYCLP1P12525 358 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 AMY2BP19961 511 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 DNM2P50570 870 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 GPR19Q15760 415 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 CFAP100Q494V2 611 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 CNNM4Q6P4Q7 775 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 ARHGAP36Q6ZRI8 547 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 UBE2R2Q712K3 238 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 RALYLQ86SE5 291 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 DDX53Q86TM3 631 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 OSTM1Q86WC4 334 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 THNSL2Q86YJ6 484 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 PPM1KQ8N3J5 372 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 DTX3Q8N9I9 347 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 SMC1BQ8NDV3 1235 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 SH3RF2Q8TEC5 729 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 ORAI3Q9BRQ5 295 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 SEC61A2Q9H9S3 476 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 NMRK2Q9NPI5 230 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 DSEQ9UL01 958 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 KANK1Q14678 1352 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 PDE4DIPQ5VU43 2346 aa4.98□□□□□ -1.61
TOPBP1-208ENST00000511439 SPATA31A1Q5TZJ5 1347 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 OVOS2A0A0G2JMS6 1433 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 OVOS2A0A0J9YW53 1432 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 OVOS2Q6IE36 1432 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 ARHGEF10O15013 1369 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 KIF15Q9NS87 1388 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 MUSKO15146 869 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 FZD7O75084 574 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 ENO2P09104 434 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 TSPY4P0CV99 314 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 TSPY10P0CW01 314 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 MECP2P51608 486 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 NEK4P51957 841 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 JAM2P57087 298 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 CDSNQ15517 529 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 TMEM177Q53S58 311 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 HS1BP3Q53T59 392 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 PIK3R6Q5UE93 754 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 CRIP3Q6Q6R5 217 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 SPRED1Q7Z699 444 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 REXO1L1PQ8IX06 675 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 IFNL2Q8IZJ0 200 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 AHI1Q8N157 1196 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 WNK4Q96J92 1243 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 SMURF1Q9HCE7 757 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 MAPRE3Q9UPY8 281 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 TESMINQ9Y4I5 508 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 LMTK2Q8IWU2 1503 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 DUOX2Q9NRD8 1548 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 C10orf71Q711Q0 1435 aa4.97□□□□□ -1.61
TOPBP1-208ENST00000511439 CDC42BPGQ6DT37 1551 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 MYO5BQ9ULV0 1848 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 M0R2C6 588 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 TRAF5O00463 557 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 SLC27A2O14975 620 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 SUV39H1O43463 412 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 ZNF623O75123 536 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 KLHL18O94889 574 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 VIL1P09327 827 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 COL6A1P12109 1028 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 FAHP16930 419 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 STAT3P40763 770 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 LBX1P52954 281 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 EPHA5P54756 1037 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 PCBP1Q15365 356 aaKnown RBP eCLIP4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 ZNF568Q3ZCX4 644 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 PAN2Q504Q3 1202 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 ZNF585AQ6P3V2 769 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 Q6ZUG5 572 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 KCTD1Q719H9 257 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 RNF180Q86T96 592 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 KIF18BQ86Y91 864 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 NLGN4XQ8N0W4 816 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 CISD2Q8N5K1 135 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 CLEC4DQ8WXI8 215 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 AJUBAQ96IF1 538 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 VPS11Q9H270 941 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 SRPK3Q9UPE1 567 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 WASF3Q9UPY6 502 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 CASKIN1Q8WXD9 1431 aa4.96□□□□□ -1.62
TOPBP1-208ENST00000511439 CBX4O00257 560 aa4.95□□□□□ -1.62
TOPBP1-208ENST00000511439 MAN2B1O00754 1011 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms