RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 NCANO14594 1321 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 KMT2BQ9UMN6 2715 aaPredicted RBP7.32□□□□□ -1.24
GYPB-212ENST00000511198 WDFY4Q6ZS81 3184 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 PRAMEF22A3QJZ6 481 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 B8ZZF3 427 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 H7BY64 318 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 CYP2C8P10632 490 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 KCNC1P48547 511 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 HSP90AA2PQ14568 343 aaPredicted RBP7.32□□□□□ -1.24
GYPB-212ENST00000511198 ST13P5Q8NFI4 369 aaPredicted RBP7.32□□□□□ -1.24
GYPB-212ENST00000511198 UHRF1Q96T88 793 aaPredicted RBP7.32□□□□□ -1.24
GYPB-212ENST00000511198 SPATA25Q9BR10 227 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 EPHX3Q9H6B9 360 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 ARHGEF4Q9NR80 690 aa7.32□□□□□ -1.24
GYPB-212ENST00000511198 COL2A1P02458 1487 aaPredicted RBP7.31□□□□□ -1.24
GYPB-212ENST00000511198 YDJCA8MPS7 323 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 PRRG2O14669 202 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 FOXD2O60548 495 aaPredicted RBP7.31□□□□□ -1.24
GYPB-212ENST00000511198 MSCO60682 206 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 GJB1P08034 283 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 SYN1P17600 705 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 TNIP1Q15025 636 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
GYPB-212ENST00000511198 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 CARFQ8N187 725 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 DPF2Q92785 391 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 ZBTB8AQ96BR9 441 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 CHAMP1Q96JM3 812 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 C11orf84Q9BUA3 381 aaPredicted RBP7.31□□□□□ -1.24
GYPB-212ENST00000511198 ADAM7Q9H2U9 754 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 GGA3Q9NZ52 723 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 ZNF652Q9Y2D9 606 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 COA3Q9Y2R0 106 aaPredicted RBP7.31□□□□□ -1.24
GYPB-212ENST00000511198 MSRB2Q9Y3D2 182 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 SCN7AQ01118 1682 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 UNC79Q9P2D8 2635 aa7.31□□□□□ -1.24
GYPB-212ENST00000511198 SPTBN4Q9H254 2564 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 TCERG1O14776 1098 aaKnown RBP7.3□□□□□ -1.24
GYPB-212ENST00000511198 TADA3O75528 432 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 SMAD4Q13485 552 aaKnown RBP7.3□□□□□ -1.24
GYPB-212ENST00000511198 PRAMEF18Q5VWM3 479 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 CD300LDQ6UXZ3 194 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 FRMD5Q7Z6J6 570 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 CXorf38Q8TB03 319 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 ASB2Q96Q27 587 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 AARSD1Q9BTE6 412 aaKnown RBP7.3□□□□□ -1.24
GYPB-212ENST00000511198 GPR27Q9NS67 375 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 CLDND1Q9NY35 253 aa7.3□□□□□ -1.24
GYPB-212ENST00000511198 SCAF8Q9UPN6 1271 aaKnown RBP7.3□□□□□ -1.24
GYPB-212ENST00000511198 SSC5DA1L4H1 1573 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 CACNA1BQ00975 2339 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 XIRP2A4UGR9 3374 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 HGSO14964 777 aaPredicted RBP7.29□□□□□ -1.24
GYPB-212ENST00000511198 STK10O94804 968 aaKnown RBP7.29□□□□□ -1.24
GYPB-212ENST00000511198 CAMTA2O94983 1202 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 FGFR1P11362 822 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 CCL5P13501 91 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 INHBEP58166 350 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 NTRK3Q16288 839 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 CR1LQ2VPA4 569 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 EMC4Q5J8M3 183 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 NBPF5PQ86XG9 351 aaPredicted RBP7.29□□□□□ -1.24
GYPB-212ENST00000511198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.29□□□□□ -1.24
GYPB-212ENST00000511198 VPS33BQ9H267 617 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 TTYH1Q9H313 450 aaPredicted RBP7.29□□□□□ -1.24
GYPB-212ENST00000511198 RAB3GAP2Q9H2M9 1393 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 ZSWIM8A7E2V4 1837 aa7.29□□□□□ -1.24
GYPB-212ENST00000511198 TCRBV5S2A0A599 114 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 PRODHO43272 600 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 HSP90AB1P08238 724 aaKnown RBP7.28□□□□□ -1.24
GYPB-212ENST00000511198 PABPC1P11940 636 aaKnown RBP7.28□□□□□ -1.24
GYPB-212ENST00000511198 FOSL2P15408 326 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 BUD31P41223 144 aaPredicted RBP7.28□□□□□ -1.24
GYPB-212ENST00000511198 STAT5AP42229 794 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 NHLH1Q02575 133 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 TMEM31Q5JXX7 168 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 NT5DC1Q5TFE4 455 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 STEAP3Q658P3 488 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 RSPO2Q6UXX9 243 aaPredicted RBP7.28□□□□□ -1.24
GYPB-212ENST00000511198 USP53Q70EK8 1073 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 ARRDC4Q8NCT1 418 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 U2AF1L4Q8WU68 220 aaKnown RBP7.28□□□□□ -1.24
GYPB-212ENST00000511198 TEPSINQ96N21 525 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 PTPN18Q99952 460 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 PHF20Q9BVI0 1012 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 TRIM55Q9BYV6 548 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 ARHGAP39Q9C0H5 1083 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 EPB41L1Q9H4G0 881 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 PCDH18Q9HCL0 1135 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 NTMQ9P121 344 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 PPARGC1AQ9UBK2 798 aaKnown RBP7.28□□□□□ -1.24
GYPB-212ENST00000511198 ZDBF2Q9HCK1 2354 aa7.28□□□□□ -1.24
GYPB-212ENST00000511198 EPG5Q9HCE0 2579 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 ST20-MTHFSA0A0A6YYL1 179 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 MANSC4A6NHS7 340 aaPredicted RBP7.27□□□□□ -1.25
GYPB-212ENST00000511198 NOBOXO60393 691 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 THBS2P35442 1172 aa7.27□□□□□ -1.25
GYPB-212ENST00000511198 SARSP49591 514 aaKnown RBP7.27□□□□□ -1.25
GYPB-212ENST00000511198 MTHFSP49914 203 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms