RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 TWF2Q6IBS0 349 aaKnown RBP25.65■■□□□ 1.7
SMAD5-207ENST00000511116 KIAA1841Q6NSI8 718 aa25.65■■□□□ 1.7
SMAD5-207ENST00000511116 BCL7CQ8WUZ0 217 aaPredicted RBP25.65■■□□□ 1.7
SMAD5-207ENST00000511116 LPPQ93052 612 aa25.65■■□□□ 1.7
SMAD5-207ENST00000511116 SH2D3AQ9BRG2 576 aa25.65■■□□□ 1.7
SMAD5-207ENST00000511116 IFT122Q9HBG6 1241 aa25.65■■□□□ 1.7
SMAD5-207ENST00000511116 PIN4Q9Y237 131 aaKnown RBP25.65■■□□□ 1.7
SMAD5-207ENST00000511116 CFAP54Q96N23 3096 aa25.65■■□□□ 1.7
SMAD5-207ENST00000511116 DENND4AQ7Z401 1863 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 MEIS3P2A8K0S8 358 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 OFD1O75665 1012 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 REC8O95072 547 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 PDGFBP01127 241 aaPredicted RBP25.64■■□□□ 1.7
SMAD5-207ENST00000511116 SP100P23497 879 aaPredicted RBP25.64■■□□□ 1.7
SMAD5-207ENST00000511116 PSMC5P62195 406 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 SSRP1Q08945 709 aaKnown RBP25.64■■□□□ 1.7
SMAD5-207ENST00000511116 MTMR3Q13615 1198 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 NOMO2Q5JPE7 1267 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 GLB1LQ6UWU2 654 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 RHPN2Q8IUC4 686 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 ZDHHC14Q8IZN3 488 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 ZNF274Q96GC6 653 aaPredicted RBP25.64■■□□□ 1.7
SMAD5-207ENST00000511116 JPH2Q9BR39 696 aaPredicted RBP25.64■■□□□ 1.7
SMAD5-207ENST00000511116 VN1R3Q9BXE9 311 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 IRF2BPLQ9H1B7 796 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 USTQ9Y2C2 406 aa25.64■■□□□ 1.7
SMAD5-207ENST00000511116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.63■■□□□ 1.69
SMAD5-207ENST00000511116 BRD1O95696 1058 aa25.63■■□□□ 1.69
SMAD5-207ENST00000511116 PPP2R5CQ13362 524 aa25.63■■□□□ 1.69
SMAD5-207ENST00000511116 KCNMB3Q9NPA1 279 aa25.63■■□□□ 1.69
SMAD5-207ENST00000511116 AGPAT5Q9NUQ2 364 aa25.63■■□□□ 1.69
SMAD5-207ENST00000511116 VAV3Q9UKW4 847 aa25.63■■□□□ 1.69
SMAD5-207ENST00000511116 MYO15AQ9UKN7 3530 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 DDX11L8A8MPP1 907 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 EML1O00423 815 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 B4GALT3O60512 393 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 NONOQ15233 471 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMAD5-207ENST00000511116 CATSPER4Q7RTX7 472 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 MRPL10Q7Z7H8 261 aaKnown RBP25.62■■□□□ 1.69
SMAD5-207ENST00000511116 ZBTB33Q86T24 672 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 KSR1Q8IVT5 923 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 AUTS2Q8WXX7 1259 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 CYP26B1Q9NR63 512 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 TSHZ2Q9NRE2 1034 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 DDX25Q9UHL0 483 aaKnown RBP25.62■■□□□ 1.69
SMAD5-207ENST00000511116 PPME1Q9Y570 386 aa25.62■■□□□ 1.69
SMAD5-207ENST00000511116 SLC37A4O43826 429 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 EPCAMP16422 314 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 RARS2Q5T160 578 aaKnown RBP25.61■■□□□ 1.69
SMAD5-207ENST00000511116 AGMOQ6ZNB7 445 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 KRT25Q7Z3Z0 450 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 C12orf76Q8N812 135 aaPredicted RBP25.61■■□□□ 1.69
SMAD5-207ENST00000511116 TM6SF1Q9BZW5 370 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 DHX33Q9H6R0 707 aaKnown RBP25.61■■□□□ 1.69
SMAD5-207ENST00000511116 DNAJB4Q9UDY4 337 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 STK39Q9UEW8 545 aa25.61■■□□□ 1.69
SMAD5-207ENST00000511116 ST18O60284 1047 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 QARSP47897 775 aaKnown RBP25.6■■□□□ 1.69
SMAD5-207ENST00000511116 SLC11A1P49279 550 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 PTPN14Q15678 1187 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 PLA2G4FQ68DD2 849 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 PGBD4Q96DM1 585 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 FAM20AQ96MK3 541 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 NLRP4Q96MN2 994 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 AIFM3Q96NN9 605 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 PCDHB2Q9Y5E7 798 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 COL4A3BPQ9Y5P4 624 aa25.6■■□□□ 1.69
SMAD5-207ENST00000511116 LILRB3O75022 631 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 WEE2P0C1S8 567 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 HOXA11P31270 313 aaPredicted RBP25.59■■□□□ 1.69
SMAD5-207ENST00000511116 INF2Q27J81 1249 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 ATAT1Q5SQI0 421 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 PPP4R3AQ6IN85 833 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 PPFIBP1Q86W92 1011 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 ZNF280BQ86YH2 543 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 TDRD5Q8NAT2 981 aaKnown RBP25.59■■□□□ 1.69
SMAD5-207ENST00000511116 WRAP73Q9P2S5 460 aaPredicted RBP25.59■■□□□ 1.69
SMAD5-207ENST00000511116 INPP5FQ9Y2H2 1132 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 PLXNA3P51805 1871 aa25.59■■□□□ 1.69
SMAD5-207ENST00000511116 CPLX1O14810 134 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 GALR2O43603 387 aaPredicted RBP25.58■■□□□ 1.69
SMAD5-207ENST00000511116 DKC1O60832 514 aaKnown RBP eCLIP25.58■■□□□ 1.69
SMAD5-207ENST00000511116 NPEPPSP55786 919 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 LONRF3Q496Y0 759 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 UBXN11Q5T124 520 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 KANK3Q6NY19 840 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 SRGAP1Q7Z6B7 1085 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 EXOC8Q8IYI6 725 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 PLCD3Q8N3E9 789 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 ZNF579Q8NAF0 562 aaKnown RBP25.58■■□□□ 1.69
SMAD5-207ENST00000511116 MINDY3Q9H8M7 445 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 CYP46A1Q9Y6A2 500 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 RIF1Q5UIP0 2472 aaKnown RBP25.58■■□□□ 1.69
SMAD5-207ENST00000511116 CNTNAP2Q9UHC6 1331 aa25.58■■□□□ 1.69
SMAD5-207ENST00000511116 PROB1E7EW31 1015 aa25.57■■□□□ 1.68
SMAD5-207ENST00000511116 P4HBP07237 508 aaKnown RBP25.57■■□□□ 1.68
SMAD5-207ENST00000511116 GCFC2P16383 781 aaKnown RBP25.57■■□□□ 1.68
SMAD5-207ENST00000511116 CA8P35219 290 aa25.57■■□□□ 1.68
SMAD5-207ENST00000511116 RNASELQ05823 741 aaKnown RBP25.57■■□□□ 1.68
SMAD5-207ENST00000511116 GPR149Q86SP6 731 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms