RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 NLRP7Q8WX94 980 aa17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 SLC7A3Q8WY07 619 aa17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 RAD54LQ92698 747 aa17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 SCLT1Q96NL6 688 aa17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 FDXACB1Q9BRP7 624 aaPredicted RBP17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 SUCLA2Q9P2R7 463 aaPredicted RBP17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 HCSTQ9UBK5 93 aa17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 MRPL42Q9Y6G3 142 aaKnown RBP17.25■□□□□ 0.35
SH3TC1-220ENST00000511002 MYH11P35749 1972 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 GTPBP6O43824 516 aaPredicted RBP17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 DGAT1O75907 488 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 PLA2G4BP0C869 781 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 STAT6P42226 847 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 SARSP49591 514 aaKnown RBP17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 MCM6Q14566 821 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 RRAGBQ5VZM2 374 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 RHPN2Q8IUC4 686 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 FIBCD1Q8N539 461 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 KCTD17Q8N5Z5 321 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 RUSC1Q9BVN2 902 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 ATP6V0A4Q9HBG4 840 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
SH3TC1-220ENST00000511002 A0A1B0GVL5 298 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 A0A1W2PQ27 194 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 A0A1W2PQ64 194 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 A0A1W2PQD8 194 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 DENND3A2RUS2 1198 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 PFKFB1P16118 471 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 CMA1P23946 247 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 CTNNB1P35222 781 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 SLC12A3P55017 1021 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 E2F4Q16254 413 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 FAM102BQ5T8I3 360 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 CCDC73Q6ZRK6 1079 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 MAEAQ7L5Y9 396 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 DHX58Q96C10 678 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 NLRP4Q96MN2 994 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 MTRQ99707 1265 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 JPH2Q9BR39 696 aaPredicted RBP17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 GOLPH3LQ9H4A5 285 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 RNF19AQ9NV58 838 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 TRANK1O15050 2925 aa17.23■□□□□ 0.35
SH3TC1-220ENST00000511002 BRWD1Q9NSI6 2320 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 STAG3L1P0CL83 205 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 FGFR1P11362 822 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 CYP11B2P19099 503 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 GPM6BQ13491 265 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 SLC24A5Q71RS6 500 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 LARP4BQ92615 738 aaKnown RBP17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 C1orf112Q9NSG2 853 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 KCNH3Q9ULD8 1083 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
SH3TC1-220ENST00000511002 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 H3BNC9 293 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 POLR2DO15514 142 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 GADD45BO75293 160 aaPredicted RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 BMPR1AP36894 532 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 NDUFA8P51970 172 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 FAM189BP81408 668 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 ODR4Q5SWX8 454 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 RINT1Q6NUQ1 792 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 C1orf186Q6ZWK4 172 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 GPBP1Q86WP2 473 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 EXOC8Q8IYI6 725 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 ASAP3Q8TDY4 903 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 CLP1Q92989 425 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 GCOM2Q9BZD3 368 aaPredicted RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 POLR3FQ9H1D9 316 aaPredicted RBP17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 IFT122Q9HBG6 1241 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 POLD4Q9HCU8 107 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 PCDHB7Q9Y5E2 793 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 COL4A3BPQ9Y5P4 624 aa17.21■□□□□ 0.35
SH3TC1-220ENST00000511002 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 GRM6O15303 877 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 GAS2O43903 313 aaKnown RBP17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 CSPG5O95196 566 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 DNM2P50570 870 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 TFF2Q03403 129 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 RAD51AP2Q09MP3 1159 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 SKIV2LQ15477 1246 aaKnown RBP17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 ARSHQ5FYA8 562 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms