RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SLFN12Q8IYM2 578 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 DAW1Q8N136 415 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 CELF4Q9BZC1 486 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 NKX2-4Q9H2Z4 354 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 FBXO2Q9UK22 296 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 TTC3P53804 2025 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 MUC3AQ02505 3323 aa8.06□□□□□ -1.12
TOPBP1-207ENST00000509162 FNDC1Q4ZHG4 1894 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 NLRC5Q86WI3 1866 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 ZBBXA8MT70 800 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 H3BQV1 296 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 STX6O43752 255 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 BAIAP3O94812 1187 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 GNAT1P11488 350 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 PRPHP41219 470 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 CAPSQ13938 189 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 ADGRE1Q14246 886 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 SF3A1Q15459 793 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 EFCAB12Q6NXP0 572 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 HERC6Q8IVU3 1022 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 HSCBQ8IWL3 235 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 TPH2Q8IWU9 490 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 SCUBE3Q8IX30 993 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 NEK9Q8TD19 979 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 TMEM143Q96AN5 459 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 FAM161BQ96MY7 647 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 POLR3CQ9BUI4 534 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 RUSC1Q9BVN2 902 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 IFIH1Q9BYX4 1025 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 IFT122Q9HBG6 1241 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 POLD4Q9HCU8 107 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 BLOC1S4Q9NUP1 217 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 MTMR10Q9NXD2 777 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 PADI3Q9ULW8 664 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 NOL7Q9UMY1 257 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 PCDHA12Q9UN75 941 aa8.05□□□□□ -1.12
TOPBP1-207ENST00000509162 A0A087WZ62 844 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 MEIS3P2A8K0S8 358 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 E9PMD0 336 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 B4GALT3O60512 393 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 USO1O60763 962 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 GJB5O95377 273 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 S1PR4O95977 384 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 CA3P07451 260 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 DARSP14868 501 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 ATP2A2P16615 1042 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 GLRA2P23416 452 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 RPA1P27694 616 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 ARL2P36404 184 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 NLRP11P59045 1033 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 HTRA4P83105 476 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 GRIN2CQ14957 1233 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 NAALADL2Q58DX5 795 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 HYIQ5T013 277 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 BRAPQ7Z569 592 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 METTL13Q8N6R0 699 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 USP38Q8NB14 1042 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 TIFAQ96CG3 184 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 CEP170P1Q96L14 293 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 CLIC6Q96NY7 704 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 FDXACB1Q9BRP7 624 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 KIFC3Q9BVG8 833 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 SLC6A16Q9GZN6 736 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 ZSWIM4Q9H7M6 989 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 TUFT1Q9NNX1 390 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 TCEAL9Q9UHQ7 104 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 USP20Q9Y2K6 914 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 RALGAPA2Q2PPJ7 1873 aa8.04□□□□□ -1.12
TOPBP1-207ENST00000509162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 VWA3AA6NCI4 1184 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 C9IYK1 514 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 RFXAPO00287 272 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 LPXNO60711 386 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 BRD1O95696 1058 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 F13A1P00488 732 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 SLC19A1P41440 591 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 NASPP49321 788 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 CRYBB1P53674 252 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 TAP1Q03518 808 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 MBTD1Q05BQ5 628 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 TBC1D8BQ0IIM8 1120 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 SPECC1Q5M775 1068 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 UBXN11Q5T124 520 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 TAS1R3Q7RTX0 852 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 RPUSD2Q8IZ73 545 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 MYOCDQ8IZQ8 938 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 MYLIPQ8WY64 445 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 SEPT8Q92599 483 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 SLC9A7Q96T83 725 aa8.03□□□□□ -1.12
TOPBP1-207ENST00000509162 PLIN2Q99541 437 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms