RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 SLC35C1Q96A29 364 aa15.41■□□□□ 0.06
TRIM41-204ENST00000508930 DDX23Q9BUQ8 820 aaKnown RBP15.41■□□□□ 0.06
TRIM41-204ENST00000508930 RXFP1Q9HBX9 757 aa15.41■□□□□ 0.06
TRIM41-204ENST00000508930 TXLNGQ9NUQ3 528 aa15.41■□□□□ 0.06
TRIM41-204ENST00000508930 SLC5A4Q9NY91 659 aa15.41■□□□□ 0.06
TRIM41-204ENST00000508930 ADAM22Q9P0K1 906 aa15.41■□□□□ 0.06
TRIM41-204ENST00000508930 PCDHA2Q9Y5H9 948 aa15.41■□□□□ 0.06
TRIM41-204ENST00000508930 BCL9O00512 1426 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 MIF4GDA9UHW6 222 aaKnown RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L15C9J2P7 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L13C9JLJ4 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L11C9JVI0 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L18D6R9N7 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L22D6RA61 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L17D6RBQ6 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L19D6RCP7 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L20D6RJB6 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 THAP12O43422 761 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 UPP2O95045 317 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 ECEL1O95672 775 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 CREB1P16220 341 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L24Q0WX57 530 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 PICALMQ13492 652 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 PRR16Q569H4 304 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 MIS18BP1Q6P0N0 1132 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 USP17L6PQ6QN14 398 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 HS2ST1Q7LGA3 356 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 PRELID2Q8N945 189 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 KRT35Q92764 455 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 GRHL1Q9NZI5 618 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 ZFATQ9P243 1243 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 TRAF3IP3Q9Y228 551 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 PNMA6FA0A0J9YX94 578 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 EME2A4GXA9 379 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 ANKRD62A6NC57 917 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 NEFHP12036 1026 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 PSMC2P35998 433 aaKnown RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 RHOT2Q8IXI1 618 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 SRRM1Q8IYB3 904 aaKnown RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 NAP1L4Q99733 375 aaKnown RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 ROPN1BQ9BZX4 212 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 CCDC134Q9H6E4 229 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 ROPN1Q9HAT0 212 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 TAS2R14Q9NYV8 317 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 NUP98P52948 1817 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 SMNDC1O75940 238 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 CCDC6Q16204 474 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 ZNF746Q6NUN9 644 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 NBPF5PQ86XG9 351 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 MYCT1Q8N699 235 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 FITM2Q8N6M3 262 aa15.4■□□□□ 0.06
TRIM41-204ENST00000508930 CDC42EP4Q9H3Q1 356 aaKnown RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 CORO1CQ9ULV4 474 aaPredicted RBP15.4■□□□□ 0.06
TRIM41-204ENST00000508930 RSPH10B2B2RC85 870 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 RSPH10BP0C881 870 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 RFC4P35249 363 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 MARCKSL1P49006 195 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 TRIP13Q15645 432 aaPredicted RBP15.39■□□□□ 0.05
TRIM41-204ENST00000508930 ARHGEF18Q6ZSZ5 1173 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 TSC22D3Q99576 134 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 CCDC77Q9BR77 488 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.39■□□□□ 0.051e-20■■■■■ 342.2
TRIM41-204ENST00000508930 USP40Q9NVE5 1235 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 CACNA1SQ13698 1873 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 FOXO6A8MYZ6 492 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 O00370 1275 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
TRIM41-204ENST00000508930 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 ZBTB48P10074 688 aaPredicted RBP15.39■□□□□ 0.05
TRIM41-204ENST00000508930 TSNAXIP1Q2TAA8 658 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 ZNF449Q6P9G9 518 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 PARD3BQ8TEW8 1205 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 BHMT2Q9H2M3 363 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM41-204ENST00000508930 PITPNM2Q9BZ72 1349 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 LRP5O75197 1615 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 ZNF76P36508 570 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 PSMC6P62333 389 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 GIT2Q14161 759 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 ARSHQ5FYA8 562 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 TTBK2Q6IQ55 1244 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 SIX2Q9NPC8 291 aa15.39■□□□□ 0.05
TRIM41-204ENST00000508930 NCANO14594 1321 aa15.38■□□□□ 0.05
TRIM41-204ENST00000508930 ALDH3A1P30838 453 aa15.38■□□□□ 0.05
TRIM41-204ENST00000508930 CTCFP49711 727 aaPredicted RBP15.38■□□□□ 0.05
TRIM41-204ENST00000508930 PPATQ06203 517 aa15.38■□□□□ 0.05
TRIM41-204ENST00000508930 CTTNQ14247 550 aaKnown RBP15.38■□□□□ 0.05
TRIM41-204ENST00000508930 TNIP1Q15025 636 aa15.38■□□□□ 0.05
TRIM41-204ENST00000508930 THEMIS2Q5TEJ8 643 aa15.38■□□□□ 0.05
TRIM41-204ENST00000508930 DPP8Q6V1X1 898 aaPredicted RBP15.38■□□□□ 0.05
TRIM41-204ENST00000508930 TRMT10CQ7L0Y3 403 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms