RNA–Protein interactions for RNA: ENST00000508855.5

CCNH-206, Transcript of cyclin H, human

TSL 1 (best) BASIC

Gene CCNH, Length 2,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-206	ENST00000508855	SAP130	Q9H0E3	1048 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	RAB17	Q9H0T7	212 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	ISCU	Q9H1K1	167 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TMEM60	Q9H2L4	133 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	ZSWIM4	Q9H7M6	989 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	PANK4	Q9NVE7	773 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	MTMR4	Q9NYA4	1195 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	DDX25	Q9UHL0	483 aa	Known RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	RASAL2	Q9UJF2	1139 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	PCDHA12	Q9UN75	941 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	GOLGA6L10	A0A0M3HER8	536 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TRIM49B	A6NDI0	452 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	EML1	O00423	815 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TRAF5	O00463	557 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CYTH3	O43739	400 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	MAPT	P10636	758 aa	Known RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	PDHB	P11177	359 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TCF3	P15923	654 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	SCP2	P22307	547 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	MAPK1	P28482	360 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	WEE1	P30291	646 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	HSPA9	P38646	679 aa	Known RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TEC	P42680	631 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	ZNF543	Q08ER8	600 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	KLHL30	Q0D2K2	578 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CETN1	Q12798	172 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	COASY	Q13057	564 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	PPP2R5A	Q15172	486 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	RPS6KA1	Q15418	735 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CRY2	Q49AN0	593 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	FAM83B	Q5T0W9	1011 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TRAPPC3L	Q5T215	181 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	MEI1	Q5TIA1	1274 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TBC1D9B	Q66K14	1250 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	LRRC31	Q6UY01	552 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	RRAGA	Q7L523	313 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TADA2B	Q86TJ2	420 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	GLYCTK	Q8IVS8	523 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CNPY4	Q8N129	248 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	VWA5B2	Q8N398	1253 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	STAG2	Q8N3U4	1231 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CNBD1	Q8NA66	436 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	ZNF280C	Q8ND82	737 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TGFBRAP1	Q8WUH2	860 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	HSH2D	Q96JZ2	352 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	FAM161B	Q96MY7	647 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CEP89	Q96ST8	783 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	MMTAG2	Q9BU76	263 aa	Known RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TANGO6	Q9C0B7	1094 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	PHACTR1	Q9C0D0	580 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	MAF1	Q9H063	256 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	SEMA6B	Q9H3T3	888 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CD209	Q9NNX6	404 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	BLOC1S4	Q9NUP1	217 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	AGPAT5	Q9NUQ2	364 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	TYW1	Q9NV66	732 aa	Known RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	KLK14	Q9P0G3	267 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	NYAP2	Q9P242	653 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	ARHGAP20	Q9P2F6	1191 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	LCMT1	Q9UIC8	334 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	THSD7A	Q9UPZ6	1657 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	BTAF1	O14981	1849 aa		4.35	□□□□□ -1.71
CCNH-206	ENST00000508855	CYP2D7	A0A087X1C5	515 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	MACROD2	A1Z1Q3	448 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	MYMK	A6NI61	221 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	LRRC53	A6NM62	1247 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	TMCO5B	A8MYB1	307 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	MIF4GD	A9UHW6	222 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	SPATA31C2	B4DYI2	1134 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	MAPK13	O15264	365 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	ICMT	O60725	284 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	AFP	P02771	609 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	TM4SF1	P30408	202 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	RFC4	P35249	363 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	MMP14	P50281	582 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	PMS1	P54277	932 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	DRG2	P55039	364 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	HADHB	P55084	474 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	NAP1L1	P55209	391 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	GABPA	Q06546	454 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	IFFO1	Q0D2I5	559 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	DHX34	Q14147	1143 aa	Known RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	HOOK3	Q86VS8	718 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	SP8	Q8IXZ3	490 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	LINC00116	Q8NCU8	138 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	MAIP1	Q8WWC4	291 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	TBC1D5	Q92609	795 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	STAM	Q92783	540 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	CENPT	Q96BT3	561 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	PNMA5	Q96PV4	448 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	IWS1	Q96ST2	819 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	PLCD4	Q9BRC7	762 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	PLVAP	Q9BX97	442 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	TAOK3	Q9H2K8	898 aa		4.34	□□□□□ -1.71
CCNH-206	ENST00000508855	TUFT1	Q9NNX1	390 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms