RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CAGE1Q8TC20 777 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 OSCP1Q8WVF1 389 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 OSBP2Q969R2 916 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 PPP1R12CQ9BZL4 782 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 IMPG2Q9BZV3 1241 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 SMARCAD1Q9H4L7 1026 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 TRAF3IP3Q9Y228 551 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 DIP2AQ14689 1571 aa11.57□□□□□ -0.56
PDLIM5-210ENST00000508216 H0Y3Z8 333 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 YKT6O15498 198 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 RNASEH2AO75792 299 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 GNL1P36915 607 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 PPARGP37231 505 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.565e-6■■■□□ 18.5
PDLIM5-210ENST00000508216 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 AP1B1Q10567 949 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CYTH1Q15438 398 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 TGFBIQ15582 683 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 SGO2Q562F6 1265 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 FAM171BQ6P995 826 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 RIBC1Q8N443 379 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 BBOF1Q8ND07 529 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 APPL2Q8NEU8 664 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 LILRB4Q8NHJ6 448 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CALML6Q8TD86 181 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CFAP36Q96G28 342 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CEP19Q96LK0 163 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 BIRC8Q96P09 236 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 RXFP1Q9HBX9 757 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 TXLNGQ9NUQ3 528 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 DBF4Q9UBU7 674 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 USH1CQ9Y6N9 552 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ZFYVE9O95405 1425 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 PREX1Q8TCU6 1659 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 EIF4E1BA6NMX2 242 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 A8MUI8 341 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 TSPAN9O75954 239 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 UNC5CO95185 931 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 KLHL2O95198 593 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 MAP3K6O95382 1288 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 GJB6O95452 261 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ATP1A3P13637 1013 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 POLR2CP19387 275 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 RASA1P20936 1047 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 TSPAN7P41732 249 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 PRCPP42785 496 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CBX5P45973 191 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 POLD2P49005 469 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 EVA1CP58658 441 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 HAUS3Q68CZ6 603 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ANKMY2Q8IV38 441 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CNGA4Q8IV77 575 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 MMAAQ8IVH4 418 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 AADATQ8N5Z0 425 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ENAHQ8N8S7 591 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ANKRD53Q8N9V6 530 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 RUFY2Q8WXA3 655 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 RMDN1Q96DB5 314 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 SAMD11Q96NU1 681 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 ZNF184Q99676 751 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 STK33Q9BYT3 514 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CCSER1Q9C0I3 900 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CD93Q9NPY3 652 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 TCP11L1Q9NUJ3 509 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 THEGQ9P2T0 379 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 STXBP5LQ9Y2K9 1186 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 SLC45A1Q9Y2W3 748 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
PDLIM5-210ENST00000508216 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 ADCY10Q96PN6 1610 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 IFT172Q9UG01 1749 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 B8ZZF3 427 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 TRAFD1O14545 582 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 MAGEB3O15480 346 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 RNMTO43148 476 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 TMCC2O75069 709 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 ZNF18P17022 549 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 DDX5P17844 614 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 HSPA1LP34931 641 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 CHKAP35790 457 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 RXRGP48443 463 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 BLVRAP53004 296 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 POLR2FP61218 127 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 LPIN1Q14693 890 aa11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 EZH2Q15910 746 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 VARS2Q5ST30 1063 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-210ENST00000508216 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms