RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 GRM7Q14831 915 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 LARP4Q71RC2 724 aaKnown RBP eCLIP4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 C11orf74Q86VG3 221 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 NXPE1Q8N323 547 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 D2HGDHQ8N465 521 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 CFHR4Q92496 578 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 EXTL1Q92935 676 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 TUBGCP5Q96RT8 1024 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 IFT22Q9H7X7 185 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 TOMM22Q9NS69 142 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 THG1LQ9NWX6 298 aaKnown RBP4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 PLA2G3Q9NZ20 509 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 APOBEC2Q9Y235 224 aaKnown RBP4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 PTPN22Q9Y2R2 807 aa4.42□□□□□ -1.7
AC008539.1-201ENST00000507653 NARSO43776 548 aaKnown RBP4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 IGSF3O75054 1194 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 ULK1O75385 1050 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 PRPF6O94906 941 aaKnown RBP4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 FKBP9O95302 570 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 MSX2P35548 267 aaPredicted RBP4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 ADCY2Q08462 1091 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 CRHR2Q13324 411 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 TUBA3CQ13748 450 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 PCOLCEQ15113 449 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 MAN2A1Q16706 1144 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 C21orf62-AS1Q17RA5 79 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 TUBA3EQ6PEY2 450 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 FRMD7Q6ZUT3 714 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 ESPNLQ6ZVH7 1005 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 FKBP9P1Q75LS8 142 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 FILIP1Q7Z7B0 1213 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 RASSF3Q86WH2 238 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 SHCBP1Q8NEM2 672 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 EMC7Q9NPA0 242 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 SYNPO2Q9UMS6 1093 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 NUMBLQ9Y6R0 609 aa4.41□□□□□ -1.7
AC008539.1-201ENST00000507653 CAPN14A8MX76 684 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 MATN2O00339 956 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 MTSS1O43312 755 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 OPHN1O60890 802 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 PPFIA4O75335 1185 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 PFKMP08237 780 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 CPEP16870 476 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 SESN3P58005 492 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 ZNF483Q8TF39 744 aaPredicted RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 RABGGTAQ92696 567 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 ERCC4Q92889 916 aaPredicted RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 SLC5A5Q92911 643 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 SLC7A6OSQ96CW6 309 aaPredicted RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 TTC1Q99614 292 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 PRRX2Q99811 253 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 SLC6A15Q9H2J7 730 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 ZNF703Q9H7S9 590 aaPredicted RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 TLR9Q9NR96 1032 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 SPTLC3Q9NUV7 552 aa4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 POLR3BQ9NW08 1133 aaPredicted RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 H2AFY2Q9P0M6 372 aaPredicted RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 REXO2Q9Y3B8 237 aaKnown RBP4.4□□□□□ -1.71
AC008539.1-201ENST00000507653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 A0A1W2PRX2 142 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 GOLGA8BA8MQT2 603 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 SEC24DO94855 1032 aaPredicted RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 EYA4O95677 639 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 ONECUT2O95948 504 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 FBLP22087 321 aaKnown RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 ADCY7P51828 1080 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 IL2P60568 153 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 NOLC1Q14978 699 aaKnown RBP eCLIP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 TBR1Q16650 682 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 CCDC142Q17RM4 750 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 PRAMEF9Q5VWM5 478 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 Q6ZSN1 163 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 CLEC14AQ86T13 490 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 GSPT2Q8IYD1 628 aaKnown RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 LEO1Q8WVC0 666 aaPredicted RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 GCDHQ92947 438 aaPredicted RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 USP7Q93009 1102 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 ZNF496Q96IT1 587 aaPredicted RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 PAWRQ96IZ0 340 aaKnown RBP4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 WDR92Q96MX6 357 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 AGAP2Q99490 1192 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 MYL10Q9BUA6 226 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 KIAA1683Q9H0B3 1180 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 CDC42EP3Q9UKI2 254 aa4.39□□□□□ -1.71
AC008539.1-201ENST00000507653 K7ESF4 209 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 ELL2O00472 640 aaPredicted RBP4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 NRP2O60462 931 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 FSBPO95073 299 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 MANFP55145 182 aaKnown RBP4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 ANTXR2P58335 489 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 ADAM8P78325 824 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 FOXL1Q12952 345 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 CNGB1Q14028 1251 aaPredicted RBP4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 DDB1Q16531 1140 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 ATP13A4Q4VNC1 1196 aa4.38□□□□□ -1.71
AC008539.1-201ENST00000507653 GJC2Q5T442 439 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms