RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-205ENST00000507316 ZC3H11AO75152 810 aaKnown RBP eCLIP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 EPB41P11171 864 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 ENDOUP21128 410 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CALB2P22676 271 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 ATP5DP30049 168 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 GSTT1P30711 240 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 PEX5P50542 639 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CLCN2P51788 898 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 MTTPP55157 894 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 GJA9P57773 515 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 ITIH3Q06033 890 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 NMIQ13287 307 aaPredicted RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CUL4AQ13619 759 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CASP8Q14790 479 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CFAP58Q5T655 872 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 NDUFAF5Q5TEU4 345 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SKAP1Q86WV1 359 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 PASD1Q8IV76 773 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 WDR75Q8IWA0 830 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SLC15A3Q8IY34 581 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SLC7A5P1Q8MH63 180 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CLASRPQ8N2M8 674 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SPERTQ8NA61 448 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 ATRIPQ8WXE1 791 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 NCSTNQ92542 709 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 EFHD2Q96C19 240 aaPredicted RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 RRP36Q96EU6 259 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 CFAP36Q96G28 342 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 FGD4Q96M96 766 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 MPHOSPH9Q99550 1183 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 NDNQ99608 321 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 HNRNPABQ99729 332 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 UQCC2Q9BRT2 126 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 LNPKQ9C0E8 428 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SLC7A5P2Q9GIP4 190 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 DRC3Q9H069 523 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 NSRP1Q9H0G5 558 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 MKS1Q9NXB0 559 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 IL1RAPL1Q9NZN1 696 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
TUSC3-205ENST00000507316 ATPIF1Q9UII2 106 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 FAM184BQ9ULE4 1060 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 TPCN1Q9ULQ1 816 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 MAPK8IP1Q9UQF2 711 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 SAMM50Q9Y512 469 aa5.55□□□□□ -1.52
TUSC3-205ENST00000507316 MYOM2P54296 1465 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 CLRN2A0PK11 232 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 HNRNPCL2B2RXH8 293 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 MATN2O00339 956 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SLC26A4O43511 780 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 HNRNPCL1O60812 293 aaKnown RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 FBXO24O75426 580 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 URI1O94763 535 aaPredicted RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 PRPF6O94906 941 aaKnown RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 S100A6P06703 90 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 LINGO3P0C6S8 592 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 TGFB3P10600 412 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 PTPN2P17706 415 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 NME2P22392 152 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 ARNTP27540 789 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 GNA15P30679 374 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SCNN1BP51168 640 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 CYP4A11Q02928 519 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 DPYSQ14117 519 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 CYP4A22Q5TCH4 519 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 TBC1D9BQ66K14 1250 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 KIAA1841Q6NSI8 718 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 C8orf74Q6P047 294 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 TMEM53Q6P2H8 277 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SEZ6L2Q6UXD5 910 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 RBM43Q6ZSC3 357 aaKnown RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SYDE1Q6ZW31 735 aaPredicted RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 RUFY3Q7L099 469 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 ZNF804AQ7Z570 1209 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 ERICH1Q86X53 443 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 ANKRD44Q8N8A2 993 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 UHMK1Q8TAS1 419 aaKnown RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 CAGE1Q8TC20 777 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 CASP10Q92851 521 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SDCCAG3Q96C92 435 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 PPP1R13BQ96KQ4 1090 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 OLFM3Q96PB7 478 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 TUBGCP5Q96RT8 1024 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SH3GL2Q99962 352 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 EPN3Q9H201 632 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 VPS16Q9H269 839 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SEPT11Q9NVA2 429 aaKnown RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SLC5A4Q9NY91 659 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 PPP1R1BQ9UD71 204 aaPredicted RBP5.54□□□□□ -1.52
TUSC3-205ENST00000507316 VTI1BQ9UEU0 232 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 PCOLCE2Q9UKZ9 415 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 SLC5A6Q9Y289 635 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 C2CD2Q9Y426 696 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 CSADQ9Y600 493 aa5.54□□□□□ -1.52
TUSC3-205ENST00000507316 NUP160Q12769 1436 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms