RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 EHMT1Q9H9B1 1298 aa10.79□□□□□ -0.68
CLCN3-205ENST00000506924 STARD7Q9NQZ5 370 aa10.79□□□□□ -0.68
CLCN3-205ENST00000506924 Q9Y3F1 56 aa10.79□□□□□ -0.68
CLCN3-205ENST00000506924 TELO2Q9Y4R8 837 aa10.79□□□□□ -0.68
CLCN3-205ENST00000506924 DNAH12Q6ZR08 3092 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 H0YGN5 161 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 J3QW42 95 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 NKRFO15226 690 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 LILRB5O75023 590 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 ATP9AO75110 1047 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 FOSP01100 380 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 CST5P28325 142 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 ZNF76P36508 570 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 RTP1P59025 263 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 GUCY1B3Q02153 619 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 GNPTABQ3T906 1256 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 NLRX1Q86UT6 975 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 ZSCAN31Q96LW9 406 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 GLT1D1Q96MS3 346 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 INPP4AQ96PE3 977 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 PBX4Q9BYU1 374 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 GLT8D2Q9H1C3 349 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 DZANK1Q9NVP4 752 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 ZMYND8Q9ULU4 1186 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-205ENST00000506924 UBIAD1Q9Y5Z9 338 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
CLCN3-205ENST00000506924 FIBPO43427 364 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 ZEB2O60315 1214 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 PQBP1O60828 265 aaKnown RBP10.77□□□□□ -0.69
CLCN3-205ENST00000506924 PRPF40AO75400 957 aaKnown RBP10.77□□□□□ -0.69
CLCN3-205ENST00000506924 SMNDC1O75940 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLCN3-205ENST00000506924 ALBP02768 609 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 MMP3P08254 477 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 ARP10275 920 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 HOXB4P17483 251 aaPredicted RBP10.77□□□□□ -0.69
CLCN3-205ENST00000506924 SREBF1P36956 1147 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 CPT1AP50416 773 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 NKX3-2P78367 333 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 AP3B2Q13367 1082 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 MTMR1Q13613 665 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 NPY5RQ15761 445 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 HSDL1Q3SXM5 330 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 CELF3Q5SZQ8 465 aaKnown RBP10.77□□□□□ -0.69
CLCN3-205ENST00000506924 XRRA1Q6P2D8 792 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 HFE2Q6ZVN8 426 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 BLIDQ8IZY5 108 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 TMEM102Q8N9M5 508 aaPredicted RBP10.77□□□□□ -0.69
CLCN3-205ENST00000506924 BICD2Q8TD16 824 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 SPATA33Q96N06 139 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 MXRA8Q9BRK3 442 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 PHF20Q9BVI0 1012 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 MLXIPQ9HAP2 919 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 PCDHA4Q9UN74 947 aa10.77□□□□□ -0.69
CLCN3-205ENST00000506924 FAM86B1E9PN63 330 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 M0R082 166 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 GIPC1O14908 333 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 STAM2O75886 525 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 FAM86B2P0C5J1 330 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 ZNF286BP0CG31 522 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 XBP1P17861 261 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 ICAM3P32942 547 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 PURAQ00577 322 aaKnown RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 TLE2Q04725 743 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 BRDTQ58F21 947 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 PEAR1Q5VY43 1037 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 ZNF417Q8TAU3 575 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 TBCKQ8TEA7 893 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 WASF1Q92558 559 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 ZNF587Q96SQ5 575 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 SMG9Q9H0W8 520 aaKnown RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 PRDM5Q9NQX1 630 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-205ENST00000506924 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
CLCN3-205ENST00000506924 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 DDX39AO00148 427 aaKnown RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 EDIL3O43854 480 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 TGFB3P10600 412 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 KCNA2P16389 499 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 ITGA7Q13683 1181 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 INF2Q27J81 1249 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 CEP55Q53EZ4 464 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 PRR16Q569H4 304 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 EARS2Q5JPH6 523 aaKnown RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 UTP14CQ5TAP6 766 aaKnown RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 PLA2G4DQ86XP0 818 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 PPTC7Q8NI37 304 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 GPRASP2Q96D09 838 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 MTG1Q9BT17 334 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 BHLHE41Q9C0J9 482 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-205ENST00000506924 NPHS2Q9NP85 383 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 KCNH7Q9NS40 1196 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 NR2E3Q9Y5X4 410 aa10.75□□□□□ -0.69
CLCN3-205ENST00000506924 ELP1O95163 1332 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms