RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CATSPER4Q7RTX7 472 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 RBM23Q86U06 439 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 SLC7A3Q8WY07 619 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 MTRQ99707 1265 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 FOXP1Q9H334 677 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 GPRC5CQ9NQ84 441 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
PDLIM7-215ENST00000506161 NT5C1B-RDH14C9J2C7 533 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 FSCN2O14926 492 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 PER2O15055 1255 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 DKC1O60832 514 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 TECP42680 631 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 HMGN5P82970 282 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 ADAM15Q13444 863 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 CAPSQ13938 189 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 RABEP1Q15276 862 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 NAALADL2Q58DX5 795 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 TTC38Q5R3I4 469 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 POTEGQ6S5H5 508 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 NOSTRINQ8IVI9 506 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 ZNF710Q8N1W2 664 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 BCL7CQ8WUZ0 217 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 PSPC1Q8WXF1 523 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 TMX3Q96JJ7 454 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 FAM105AQ9NUU6 356 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 CLEC1BQ9P126 229 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 C5orf42Q9H799 3197 aa18.66■□□□□ 0.58
PDLIM7-215ENST00000506161 DCXO43602 365 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 OR52Z1P0C646 297 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 GLRA2P23416 452 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 ARL2P36404 184 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 NRIP1P48552 1158 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 SAFBQ15424 915 aaKnown RBP eCLIP18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 IL17AQ16552 155 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 AMHR2Q16671 573 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 TWF2Q6IBS0 349 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 AGMOQ6ZNB7 445 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 THNSL1Q8IYQ7 743 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 JPH2Q9BR39 696 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 ANKEF1Q9NU02 776 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 PCDHB12Q9Y5F1 795 aa18.65■□□□□ 0.58
PDLIM7-215ENST00000506161 TRIP11Q15643 1979 aa18.64■□□□□ 0.58
PDLIM7-215ENST00000506161 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 EOMESO95936 686 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 LAG3P18627 525 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 U2AF2P26368 475 aaKnown RBP eCLIP18.64■□□□□ 0.577e-7■■■□□ 15.8
PDLIM7-215ENST00000506161 FAM43BQ6ZT52 329 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 LRRC43Q8N309 656 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 FAM184AQ8NB25 1140 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 BSNDQ8WZ55 320 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 CPB2Q96IY4 423 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 MSLNLQ96KJ4 702 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 EIF2AQ9BY44 585 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 POLD4Q9HCU8 107 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 DACT1Q9NYF0 836 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 PPME1Q9Y570 386 aa18.64■□□□□ 0.57
PDLIM7-215ENST00000506161 TTLL13PA6NNM8 815 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 PP2D1A8MPX8 630 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 HIDE1A8MVS5 230 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 B4GALT5O43286 388 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 MBTPS2O43462 519 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 TSPAN1O60635 241 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 OFD1O75665 1012 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 EDN1P05305 212 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 PTENP60484 403 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 CDC42EP1Q00587 391 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 MBTD1Q05BQ5 628 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 PUS10Q3MIT2 529 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 PLPP4Q5VZY2 271 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 SRGAP1Q7Z6B7 1085 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 CDR2LQ86X02 465 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 ZNF280BQ86YH2 543 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 FEZF2Q8TBJ5 459 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 VN1R3Q9BXE9 311 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 POLR3FQ9H1D9 316 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 RNF39Q9H2S5 420 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 NRDE2Q9H7Z3 1164 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 TLR9Q9NR96 1032 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 TBC1D13Q9NVG8 400 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 DNAJB4Q9UDY4 337 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 PCDHB2Q9Y5E7 798 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 PLXNA3P51805 1871 aa18.63■□□□□ 0.57
PDLIM7-215ENST00000506161 ZNF623O75123 536 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 DDHD2O94830 711 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 BCAR1P56945 870 aa18.62■□□□□ 0.57
PDLIM7-215ENST00000506161 PLCB3Q01970 1234 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms