RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 DCNP07585 359 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 FGFR1P11362 822 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 GLULP15104 373 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 EPCAMP16422 314 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 IBSPP21815 317 aaPredicted RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 SP4Q02446 784 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 TMEM62Q0P6H9 643 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 ATAT1Q5SQI0 421 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 XRRA1Q6P2D8 792 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 KCNT2Q6UVM3 1135 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 LRRC55Q6ZSA7 311 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 TMC7Q7Z402 723 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 TBC1D10CQ8IV04 446 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 C1orf210Q8IVY1 113 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 MRPL43Q8N983 215 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 RNF217Q8TC41 542 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 MTMR8Q96EF0 704 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 OCSTAMPQ9BR26 566 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 FAM49AQ9H0Q0 323 aaPredicted RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 DZANK1Q9NVP4 752 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 MAP3K20Q9NYL2 800 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 WNT16Q9UBV4 365 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 PUF60Q9UHX1 559 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 PCDHB7Q9Y5E2 793 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 WDR81Q562E7 1941 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 DSPP15924 2871 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
VCAN-206ENST00000505615 GSTTP1A0A1W2PQM5 241 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 PRR5-ARHGAP8B1AHC4 643 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 FIBPO43427 364 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 IGHA1P01876 353 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 MARK3P27448 753 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 PPM1AP35813 382 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 TCF7P36402 384 aaPredicted RBP8.06□□□□□ -1.12
VCAN-206ENST00000505615 ARHGAP8P85298 464 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 LMNB2Q03252 620 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 SMC1AQ14683 1233 aaKnown RBP8.06□□□□□ -1.12
VCAN-206ENST00000505615 SLC35G1Q2M3R5 365 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 GNPTABQ3T906 1256 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 ASPRV1Q53RT3 343 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 SPECC1Q5M775 1068 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 IER5Q5VY09 327 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 PHLDB3Q6NSJ2 640 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 CCDC149Q6ZUS6 474 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 SV2AQ7L0J3 742 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 OTOP3Q7RTS5 596 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 VWA5B2Q8N398 1253 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 SAMD3Q8N6K7 520 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 PI4K2BQ8TCG2 481 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 SLC22A17Q8WUG5 538 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 COL26A1Q96A83 441 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 ACSF2Q96CM8 615 aaPredicted RBP8.06□□□□□ -1.12
VCAN-206ENST00000505615 ZNF558Q96NG5 402 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 CASD1Q96PB1 797 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 ADAM2Q99965 735 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 SENP7Q9BQF6 1050 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 ZKSCAN3Q9BRR0 538 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 ARHGAP9Q9BRR9 750 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 AMNQ9BXJ7 453 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 CELF4Q9BZC1 486 aaKnown RBP8.06□□□□□ -1.12
VCAN-206ENST00000505615 PARD6AQ9NPB6 346 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 RGS18Q9NS28 235 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 IGSF9Q9P2J2 1179 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 NCDNQ9UBB6 729 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 CA14Q9ULX7 337 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 PCDHA1Q9Y5I3 950 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 NAV2Q8IVL1 2488 aa8.06□□□□□ -1.12
VCAN-206ENST00000505615 MYH9P35579 1960 aaKnown RBP8.06□□□□□ -1.12
VCAN-206ENST00000505615 ZMYM6O95789 1325 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 NEDD4P46934 1319 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 STAM2O75886 525 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 FGAP02671 866 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 RPLP2P05387 115 aaKnown RBP8.05□□□□□ -1.12
VCAN-206ENST00000505615 INSRRP14616 1297 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 HAND2P61296 217 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 IGBP1P78318 339 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 FAM189BP81408 668 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 PPM1JQ5JR12 505 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 TMC5Q6UXY8 1006 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 SLC24A5Q71RS6 500 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 GPR149Q86SP6 731 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 FCHSD1Q86WN1 690 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 DGKHQ86XP1 1220 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 SLC39A11Q8N1S5 342 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 TRAPPC12Q8WVT3 735 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 RSAD2Q8WXG1 361 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 AUTS2Q8WXX7 1259 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 GPATCH3Q96I76 525 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 CHAMP1Q96JM3 812 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 INSM2Q96T92 566 aaPredicted RBP8.05□□□□□ -1.12
VCAN-206ENST00000505615 PCYT2Q99447 389 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 TMEM117Q9H0C3 514 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 ZBP1Q9H171 429 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 VAT1LQ9HCJ6 419 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms