RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 KCNF1Q9H3M0 494 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 ARNT2Q9HBZ2 717 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 DCP1AQ9NPI6 582 aaPredicted RBP6.39□□□□□ -1.39
SNX25-203ENST00000504959 MCM9Q9NXL9 1143 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 PPP1R9AQ9ULJ8 1098 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 CDK5RAP2Q96SN8 1893 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 MROH7-TTC4A0A0A0MT08 1334 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 A0A087WWV3 80 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 GABRDO14764 452 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 FANCGO15287 622 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 ORC4O43929 436 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 DLX3O60479 287 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
SNX25-203ENST00000504959 CAND2O75155 1236 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 LDHCP07864 332 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 KRT2P35908 639 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 GAS6Q14393 721 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 PTPAQ15257 358 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 SLC4A8Q2Y0W8 1093 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 FAM47AQ5JRC9 791 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 SYCP2LQ5T4T6 812 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 RESP18Q5W5W9 173 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 SLC6A19Q695T7 634 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 SARM1Q6SZW1 724 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 OLFM4Q6UX06 510 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 C8orf86Q6ZUL3 223 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 TXNRD3Q86VQ6 643 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 HID1Q8IV36 788 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 DHX40Q8IX18 779 aaKnown RBP6.39□□□□□ -1.39
SNX25-203ENST00000504959 CNNM3Q8NE01 707 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 BTN2A2Q8WVV5 523 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 MRGPRX3Q96LB0 322 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 CLIC6Q96NY7 704 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
SNX25-203ENST00000504959 PRDM16Q9HAZ2 1276 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 GGA1Q9UJY5 639 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 TRHDEQ9UKU6 1024 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 PYCARDQ9ULZ3 195 aa6.39□□□□□ -1.39
SNX25-203ENST00000504959 MYH1P12882 1939 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 SMIM22K7EJ46 135 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 NEMP1O14524 444 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 KRT18P05783 430 aaKnown RBP6.38□□□□□ -1.39
SNX25-203ENST00000504959 KIF5BP33176 963 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 ID3Q02535 119 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 SETDB1Q15047 1291 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 SBK1Q52WX2 424 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 ISM2Q6H9L7 571 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 SHC4Q6S5L8 630 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 SMAP1Q8IYB5 467 aaPredicted RBP6.38□□□□□ -1.39
SNX25-203ENST00000504959 CNTD1Q8N815 330 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 MPHOSPH6Q99547 160 aaKnown RBP6.38□□□□□ -1.39
SNX25-203ENST00000504959 BPIFA3Q9BQP9 254 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 KAT14Q9H8E8 782 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 AASDHPPTQ9NRN7 309 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 VPS54Q9P1Q0 977 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 NRBP1Q9UHY1 535 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 KCNH3Q9ULD8 1083 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 MYH8P13535 1937 aa6.38□□□□□ -1.39
SNX25-203ENST00000504959 BAZ2BQ9UIF8 2168 aaKnown RBP6.37□□□□□ -1.39
SNX25-203ENST00000504959 hCG_1642624A0A1W2PR95 340 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 SPDYE3A6NKU9 549 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 CREB3O43889 395 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 BRINP1O60477 761 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 NEMFO60524 1076 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 UFL1O94874 794 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 SMC2O95347 1197 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 PLEKHA8P1O95397 391 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 ASLP04424 464 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 SERPINB2P05120 415 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 CYP2D6P10635 497 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 CD247P20963 164 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 GSK3AP49840 483 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 GABREP78334 506 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 PNOCQ13519 176 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNX25-203ENST00000504959 SUZ12Q15022 739 aaKnown RBP6.37□□□□□ -1.39
SNX25-203ENST00000504959 DPCR1Q3MIW9 517 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 PRAMEF13Q5VWM6 474 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 PRR5LQ6MZQ0 368 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 KRBA2Q6ZNG9 492 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 SV2AQ7L0J3 742 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 KRT27Q7Z3Y8 459 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 SPATS2Q86XZ4 545 aaKnown RBP6.37□□□□□ -1.39
SNX25-203ENST00000504959 ZNF444Q8N0Y2 327 aaPredicted RBP6.37□□□□□ -1.39
SNX25-203ENST00000504959 CYB5D2Q8WUJ1 264 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 MKRN2Q9H000 416 aaKnown RBP6.37□□□□□ -1.39
SNX25-203ENST00000504959 ZNF287Q9HBT7 754 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 DISC1Q9NRI5 854 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 KCNK4Q9NYG8 393 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 GDF2Q9UK05 429 aaPredicted RBP6.37□□□□□ -1.39
SNX25-203ENST00000504959 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
SNX25-203ENST00000504959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNX25-203ENST00000504959 EMC9Q9Y3B6 208 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms