RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 DDR1Q08345 913 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
CASC9-201ENST00000504531 NFIL3Q16649 462 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 ASTE1Q2TB18 679 aaPredicted RBP9.69□□□□□ -0.86
CASC9-201ENST00000504531 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
CASC9-201ENST00000504531 ATRNL1Q5VV63 1379 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 HAUS3Q68CZ6 603 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 CDC42EP5Q6NZY7 148 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 KIAA1328Q86T90 577 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 FMNL3Q8IVF7 1028 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 MMGT1Q8N4V1 131 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 ERMNQ8TAM6 284 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 SNX29Q8TEQ0 813 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 HAS1Q92839 578 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 JAKMIP2Q96AA8 810 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 MASTLQ96GX5 879 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 CEP72Q9P209 647 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 DDX25Q9UHL0 483 aaKnown RBP9.69□□□□□ -0.86
CASC9-201ENST00000504531 MAPK8IP1Q9UQF2 711 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
CASC9-201ENST00000504531 BZW2Q9Y6E2 419 aaKnown RBP9.69□□□□□ -0.86
CASC9-201ENST00000504531 CES2O00748 559 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 ZBTB39O15060 712 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 PLA2G6O60733 806 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 ABL1P00519 1130 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 FCER1AP12319 257 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 NPR3P17342 541 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 MPSTP25325 297 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 TNFRSF8P28908 595 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.86
CASC9-201ENST00000504531 DGKGP49619 791 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 PTPN21Q16825 1174 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 FAM26FQ5R3K3 315 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 DPP8Q6V1X1 898 aaPredicted RBP9.68□□□□□ -0.86
CASC9-201ENST00000504531 TMEM179Q6ZVK1 233 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 ZNF771Q7L3S4 317 aaPredicted RBP9.68□□□□□ -0.86
CASC9-201ENST00000504531 CERS5Q8N5B7 392 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 EIF1ADQ8N9N8 165 aaKnown RBP9.68□□□□□ -0.86
CASC9-201ENST00000504531 NEK11Q8NG66 645 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 GPR152Q8TDT2 470 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.68□□□□□ -0.86
CASC9-201ENST00000504531 SECISBP2LQ93073 1101 aaKnown RBP9.68□□□□□ -0.86
CASC9-201ENST00000504531 UBA5Q9GZZ9 404 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 IGFLR1Q9H665 355 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 VAT1LQ9HCJ6 419 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 PLCB1Q9NQ66 1216 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 AGPAT5Q9NUQ2 364 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 AIPL1Q9NZN9 384 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.68□□□□□ -0.86
CASC9-201ENST00000504531 CALCOCO1Q9P1Z2 691 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 GUCA1BQ9UMX6 200 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 JAG2Q9Y219 1238 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 PCDHA2Q9Y5H9 948 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 ANKRD31Q8N7Z5 1873 aa9.68□□□□□ -0.86
CASC9-201ENST00000504531 A6NNZ2 444 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 SLC37A4O43826 429 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 RPS6KA5O75582 802 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 GFPT2O94808 682 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 SERPING1P05155 500 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 KCNA3P22001 575 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 TARSP26639 723 aaKnown RBP9.67□□□□□ -0.86
CASC9-201ENST00000504531 RPA1P27694 616 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 CHRNA5P30532 468 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 SNRPNP63162 240 aaKnown RBP9.67□□□□□ -0.86
CASC9-201ENST00000504531 BMT2Q1RMZ1 405 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 TUBB8Q3ZCM7 444 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 STYK1Q6J9G0 422 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 FRMD5Q7Z6J6 570 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 FAM71BQ8TC56 605 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 TMEM174Q8WUU8 243 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 COA7Q96BR5 231 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 ALS2CR12Q96Q35 445 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 POLR3CQ9BUI4 534 aaPredicted RBP9.67□□□□□ -0.86
CASC9-201ENST00000504531 AMNQ9BXJ7 453 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 DEFB129Q9H1M3 183 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 METTL14Q9HCE5 456 aaKnown RBP9.67□□□□□ -0.86
CASC9-201ENST00000504531 SLC39A2Q9NP94 309 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 DDX4Q9NQI0 724 aaKnown RBP9.67□□□□□ -0.86
CASC9-201ENST00000504531 PANK4Q9NVE7 773 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 DNAJB12Q9NXW2 375 aaKnown RBP9.67□□□□□ -0.86
CASC9-201ENST00000504531 ZFATQ9P243 1243 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 SNX12Q9UMY4 172 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 TRAF3IP3Q9Y228 551 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 PCDHA13Q9Y5I0 950 aa9.67□□□□□ -0.86
CASC9-201ENST00000504531 MYH4Q9Y623 1939 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 GTPBP10A4D1E9 387 aaKnown RBP9.66□□□□□ -0.86
CASC9-201ENST00000504531 PDXKO00764 312 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 PPP1R11O60927 126 aaPredicted RBP9.66□□□□□ -0.86
CASC9-201ENST00000504531 TDP2O95551 362 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 HOXB4P17483 251 aaPredicted RBP9.66□□□□□ -0.86
CASC9-201ENST00000504531 GAP43P17677 238 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 SREBF1P36956 1147 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 CRKP46108 304 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 EIF1AXP47813 144 aaKnown RBP9.66□□□□□ -0.86
CASC9-201ENST00000504531 COASYQ13057 564 aa9.66□□□□□ -0.86
CASC9-201ENST00000504531 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
CASC9-201ENST00000504531 CERKLQ49MI3 558 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms