RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 MRPL10Q7Z7H8 261 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 CATSPER3Q86XQ3 398 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 NOSTRINQ8IVI9 506 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 EXOC8Q8IYI6 725 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 SLC39A11Q8N1S5 342 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 EFHBQ8N7U6 833 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 LPPQ93052 612 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 SCLT1Q96NL6 688 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 MTRQ99707 1265 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 INO80BQ9C086 356 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 TLR9Q9NR96 1032 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 PIN4Q9Y237 131 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 PCDHB12Q9Y5F1 795 aa15.61■□□□□ 0.09
PDLIM7-211ENST00000504318 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 ASAP2O43150 1006 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 OFD1O75665 1012 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 DGAT1O75907 488 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 EYA4O95677 639 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 XRCC6P12956 609 aaKnown RBP eCLIP15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 GLRA2P23416 452 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 AFF1P51825 1210 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 RBM10P98175 930 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 CAPSQ13938 189 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 ZNF174Q15697 407 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 ECM1Q16610 540 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 CATSPER4Q7RTX7 472 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 TMEM173Q86WV6 379 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 RNF149Q8NC42 400 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 PIGOQ8TEQ8 1089 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 TCP11Q8WWU5 503 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 MRPS27Q92552 414 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 POLR3CQ9BUI4 534 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 C11orf16Q9NQ32 467 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 AAASQ9NRG9 546 aa15.6■□□□□ 0.09
PDLIM7-211ENST00000504318 MBTPS2O43462 519 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 MARCH6O60337 910 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 TSPAN1O60635 241 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 OR52Z1P0C646 297 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 SRGAP2CP0DJJ0 459 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 ATP2B1P20020 1258 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 TRAPPC10P48553 1259 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 ZP2Q05996 745 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 MBTD1Q05BQ5 628 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 SAFBQ15424 915 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 SMAD2Q15796 467 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 CSPP1Q1MSJ5 1256 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 PUS10Q3MIT2 529 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 TTC38Q5R3I4 469 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 TWF2Q6IBS0 349 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 THNSL1Q8IYQ7 743 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 SMG8Q8ND04 991 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 BCL7CQ8WUZ0 217 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 NFKBIZQ9BYH8 718 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 EPHX3Q9H6B9 360 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 TUFT1Q9NNX1 390 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 TBC1D13Q9NVG8 400 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 DBR1Q9UK59 544 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 PCDHB2Q9Y5E7 798 aa15.59■□□□□ 0.09
PDLIM7-211ENST00000504318 INPPL1O15357 1258 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 RPA1P27694 616 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 TECP42680 631 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 NRIP1P48552 1158 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 RAB27AP51159 221 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 COASYQ13057 564 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 IL17AQ16552 155 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 DUSP6Q16828 381 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 TMEM184AQ6ZMB5 413 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 RNF169Q8NCN4 708 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 SMRP1Q8NCR6 262 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 RSPH1Q8WYR4 309 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 TMX3Q96JJ7 454 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 ZNF558Q96NG5 402 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 VN1R3Q9BXE9 311 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 IGFLR1Q9H665 355 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 NRDE2Q9H7Z3 1164 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 GPRC5CQ9NQ84 441 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 PCDHB6Q9Y5E3 794 aa15.58■□□□□ 0.08
PDLIM7-211ENST00000504318 HIDE1A8MVS5 230 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 PER2O15055 1255 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 BCAR1P56945 870 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 SMAD4Q13485 552 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 MXD4Q14582 209 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 LONRF3Q496Y0 759 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 SPOUT1Q5T280 376 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 CDCA2Q69YH5 1023 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 PDE12Q6L8Q7 609 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 RBM23Q86U06 439 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 IGSF22Q8N9C0 903 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 BSNDQ8WZ55 320 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 EIF2AQ9BY44 585 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 MRPL9Q9BYD2 267 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 DNAJB4Q9UDY4 337 aa15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 BARX2Q9UMQ3 279 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-211ENST00000504318 NT5C1B-RDH14C9J2C7 533 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms