RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SLC11A1P49279 550 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 NRLP54845 237 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 ACTR2P61160 394 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 SIM2Q14190 667 aaPredicted RBP14.31□□□□□ -0.12
LSM6-204ENST00000504181 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
LSM6-204ENST00000504181 RSPO2Q6UXX9 243 aaPredicted RBP14.31□□□□□ -0.12
LSM6-204ENST00000504181 SPATA31D4Q6ZUB0 917 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 TPRG1Q6ZUI0 275 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 MAP4K1Q92918 833 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 CUL5Q93034 780 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 PHKBQ93100 1093 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 RIOX1Q9H6W3 641 aa14.31□□□□□ -0.12
LSM6-204ENST00000504181 MRPL17Q9NRX2 175 aaKnown RBP14.31□□□□□ -0.12
LSM6-204ENST00000504181 A0A0U1RQF3 1178 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
LSM6-204ENST00000504181 TAF4O00268 1085 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 NCAM2O15394 837 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 CYTH3O43739 400 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 KCNK5O95279 499 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 GLUD1P00367 558 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 SPINK2P20155 84 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 AK2P54819 239 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 RNASELQ05823 741 aaKnown RBP14.3□□□□□ -0.12
LSM6-204ENST00000504181 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 ELMSAN1Q6PJG2 1045 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 LPPQ93052 612 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 ZNF668Q96K58 619 aaPredicted RBP14.3□□□□□ -0.12
LSM6-204ENST00000504181 TBC1D13Q9NVG8 400 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 ZSWIM5Q9P217 1185 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 INPP5FQ9Y2H2 1132 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 COL1A2P08123 1366 aa14.3□□□□□ -0.12
LSM6-204ENST00000504181 CARNS1A5YM72 827 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 MEIS2O14770 477 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 HBP1O60381 514 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 B4GALT3O60512 393 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 FOXD2O60548 495 aaPredicted RBP14.29□□□□□ -0.12
LSM6-204ENST00000504181 ADH1AP07327 375 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 FGFR4P22455 802 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 LIMK1P53667 647 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 FOXC1Q12948 553 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
LSM6-204ENST00000504181 SF3A2Q15428 464 aaKnown RBP14.29□□□□□ -0.12
LSM6-204ENST00000504181 PSAPL1Q6NUJ1 521 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 METTL13Q8N6R0 699 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
LSM6-204ENST00000504181 NT5C3AQ9H0P0 336 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 DPP7Q9UHL4 492 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 LAMA5O15230 3695 aa14.29□□□□□ -0.12
LSM6-204ENST00000504181 TMEM8BA6NDV4 472 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 ZBTB42B2RXF5 422 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 ZNF213O14771 459 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 TEX28O15482 410 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 C22orf31O95567 290 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 URODP06132 367 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 MS4A1P11836 297 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 NLRP11P59045 1033 aaKnown RBP14.28□□□□□ -0.12
LSM6-204ENST00000504181 PFKPQ01813 784 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 FZD5Q13467 585 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 UBAC1Q9BSL1 405 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 RXFP3Q9NSD7 469 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 AKT3Q9Y243 479 aa14.28□□□□□ -0.12
LSM6-204ENST00000504181 F5P12259 2224 aa14.27□□□□□ -0.12
LSM6-204ENST00000504181 BPTFQ12830 3046 aa14.27□□□□□ -0.12
LSM6-204ENST00000504181 FSHRP23945 695 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 RBM25P49756 843 aaKnown RBP14.27□□□□□ -0.13
LSM6-204ENST00000504181 SLC26A2P50443 739 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 CLCN3P51790 818 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 PPP2R5DQ14738 602 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 CCDC6Q16204 474 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 NOMO2Q5JPE7 1267 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 ZNF484Q5JVG2 852 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 ZNF280BQ86YH2 543 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 C12orf50Q8NA57 414 aaPredicted RBP14.27□□□□□ -0.13
LSM6-204ENST00000504181 ZCCHC14Q8WYQ9 949 aaKnown RBP14.27□□□□□ -0.13
LSM6-204ENST00000504181 RPS6KC1Q96S38 1066 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 NELL2Q99435 816 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 KXD1Q9BQD3 176 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 ADAM33Q9BZ11 813 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 DCTPP1Q9H773 170 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 NDRG2Q9UN36 371 aaKnown RBP14.27□□□□□ -0.13
LSM6-204ENST00000504181 ZFP37Q9Y6Q3 630 aaPredicted RBP14.27□□□□□ -0.13
LSM6-204ENST00000504181 NUP205Q92621 2012 aa14.27□□□□□ -0.13
LSM6-204ENST00000504181 NAV2Q8IVL1 2488 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 PIK3CDO00329 1044 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 BACH1O14867 736 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 HRO43593 1189 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
LSM6-204ENST00000504181 ADCY1Q08828 1119 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
LSM6-204ENST00000504181 GRM4Q14833 912 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 STPG1Q5TH74 334 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 ZNF852Q6ZMS4 543 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 MTSS1LQ765P7 747 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 TRMT1LQ7Z2T5 733 aaKnown RBP14.26□□□□□ -0.13
LSM6-204ENST00000504181 PALB2Q86YC2 1186 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms