RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 FLT1P17948 1338 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ZEB2O60315 1214 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 IDH1O75874 414 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 ATP1A1P05023 1023 aaKnown RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 MYBP10242 640 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 SMARCA1P28370 1054 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 KRT9P35527 623 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ZBED6P86452 979 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 PTPN11Q06124 597 aaPredicted RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 AP3B2Q13367 1082 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 MAP9Q49MG5 647 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 RRAGBQ5VZM2 374 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 MAP1SQ66K74 1059 aaPredicted RBP4.33□□□□□ -1.72
CLTC-209ENST00000498711 HGSNATQ68CP4 663 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 WWC2Q6AWC2 1192 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 FOXR1Q6PIV2 292 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 PDZD3Q86UT5 571 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CREG2Q8IUH2 290 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 MICALL1Q8N3F8 863 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 MREGQ8N565 214 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CCDC155Q8N6L0 562 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 ZSCAN1Q8NBB4 408 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 CCDC148Q8NFR7 591 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 LRRC15Q8TF66 581 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 IGFLR1Q9H665 355 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 VPS18Q9P253 973 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 SAR1BQ9Y6B6 198 aa4.33□□□□□ -1.72
CLTC-209ENST00000498711 GRIN2DO15399 1336 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 A0A087WUV0 522 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 CCDC194A0A1B0GVG4 234 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ERICH2A1L162 156 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 UPK3BL1B0FP48 263 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 UPK3BL2E5RIL1 263 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 N4BP3O15049 544 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ADAMTS3O15072 1205 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 MAN1A2O60476 641 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PLEKHA8P1O95397 391 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 AVPP01185 164 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 APPP05067 770 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CASP1P29466 404 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CDC25AP30304 524 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 LMAN1P49257 510 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PMS1P54277 932 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 STX17P56962 302 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SF3B3Q15393 1217 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 ZNF174Q15697 407 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PARP10Q53GL7 1025 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GLE1Q53GS7 698 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 ZC3H12BQ5HYM0 836 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 SLC10A5Q5PT55 438 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SUSD4Q5VX71 490 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ALS2CLQ60I27 953 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 RCSD1Q6JBY9 416 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 INTS5Q6P9B9 1019 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 GBP6Q6ZN66 633 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ZC3H3Q8IXZ2 948 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 RAVER1Q8IY67 606 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 AFAP1L1Q8TED9 768 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 MFSD3Q96ES6 412 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TSGA10Q9BZW7 698 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GDF3Q9NR23 364 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 DNAJB12Q9NXW2 375 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 VPS54Q9P1Q0 977 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ASAP1Q9ULH1 1129 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SIK3Q9Y2K2 1263 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 DDX60LQ5H9U9 1706 aaKnown RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 SCN4AP35499 1836 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 BTNL10A8MVZ5 291 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GOLGA8KD6RF30 607 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CES2O00748 559 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ZNF263O14978 683 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CAMTA2O94983 1202 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 HTR3BO95264 441 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 NTSR2O95665 410 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 ESRRAP11474 423 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 SCG2P13521 617 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 FGFR3P22607 806 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CCNE1P24864 410 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 AFMP43652 599 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 VAV2P52735 878 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 PPFIA1Q13136 1202 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 UBE4AQ14139 1066 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 DBN1Q16643 649 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SLC35G1Q2M3R5 365 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 TM4SF20Q53R12 229 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 NCAPH2Q6IBW4 605 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CENPPQ6IPU0 288 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 VHLLQ6RSH7 139 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 LEKR1Q6ZMV7 388 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CATIPQ7Z7H3 387 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 COL23A1Q86Y22 540 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 FMNL3Q8IVF7 1028 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 NIM1KQ8IY84 436 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 EFCAB13Q8IY85 973 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 LINC00116Q8NCU8 138 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 CHAC2Q8WUX2 184 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 SYN2Q92777 582 aaPredicted RBP4.32□□□□□ -1.72
CLTC-209ENST00000498711 NINJ1Q92982 152 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 GMCL1Q96IK5 515 aa4.32□□□□□ -1.72
CLTC-209ENST00000498711 AK8Q96MA6 479 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms