RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ZNF689Q96CS4 500 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-209ENST00000498708 NEK1Q96PY6 1258 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 SLC30A3Q99726 388 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 TMEM47Q9BQJ4 181 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 RTP3Q9BQQ7 232 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 PHACTR1Q9C0D0 580 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 CPVLQ9H3G5 476 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 POMKQ9H5K3 350 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 NR2E1Q9Y466 385 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 MRPL42Q9Y6G3 142 aaKnown RBP6.46□□□□□ -1.38
SPTA1-209ENST00000498708 TTC41PQ6P2S7 1318 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 RAD50Q92878 1312 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 LOC400499M0QZD8 3231 aa6.46□□□□□ -1.38
SPTA1-209ENST00000498708 PLIN4Q96Q06 1357 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 BPTFQ12830 3046 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 SFI1A8K8P3 1242 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 PRR5-ARHGAP8B1AHC4 643 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 M0R082 166 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 NKRFO15226 690 aaKnown RBP eCLIP6.45□□□□□ -1.38
SPTA1-209ENST00000498708 SORBS3O60504 671 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ICAM1P05362 532 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 GOLGA8HP0CJ92 632 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 MX1P20591 662 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ADH7P40394 386 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 GATA4P43694 442 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ARHGAP8P85298 464 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 DUSP6Q16828 381 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 USH1GQ495M9 461 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 SH3PXD2AQ5TCZ1 1133 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ANKRD45Q5TZF3 282 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 LLGL2Q6P1M3 1020 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 RNF207Q6ZRF8 634 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 CHST3Q7LGC8 479 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 TSEN2Q8NCE0 465 aaKnown RBP6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ZNF417Q8TAU3 575 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 DCAF4Q8WV16 495 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 P2RX5Q93086 422 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 FAM227BQ96M60 508 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ZKSCAN3Q9BRR0 538 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 UBA5Q9GZZ9 404 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 RANBP17Q9H2T7 1088 aaKnown RBP6.45□□□□□ -1.38
SPTA1-209ENST00000498708 PARD6AQ9NPB6 346 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 NCDNQ9UBB6 729 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ADD3Q9UEY8 706 aaKnown RBP6.45□□□□□ -1.38
SPTA1-209ENST00000498708 ANGPTL2Q9UKU9 493 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 SYNPO2Q9UMS6 1093 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 NAV2Q8IVL1 2488 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 CNOT1A5YKK6 2376 aaKnown RBP6.45□□□□□ -1.38
SPTA1-209ENST00000498708 TTC3P53804 2025 aa6.45□□□□□ -1.38
SPTA1-209ENST00000498708 DMXL2Q8TDJ6 3036 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 A0A0D9SFI3 127 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 HAS3O00219 553 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 PLA2G6O60733 806 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 PROS1P07225 676 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 CTSHP09668 335 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 WEE2P0C1S8 567 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 ZNF286BP0CG31 522 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 CASTP20810 708 aaKnown RBP6.44□□□□□ -1.38
SPTA1-209ENST00000498708 ERVFC1P60507 584 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 RPS6P62753 249 aaKnown RBP6.44□□□□□ -1.38
SPTA1-209ENST00000498708 LMNB2Q03252 620 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 TYRO3Q06418 890 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 ARHGAP1Q07960 439 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 LY6KQ17RY6 165 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 KIAA0753Q2KHM9 967 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 SPECC1Q5M775 1068 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 ZC3H14Q6PJT7 736 aaKnown RBP6.44□□□□□ -1.38
SPTA1-209ENST00000498708 TMEM184AQ6ZMB5 413 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 SEPT14Q6ZU15 432 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 SERINC5Q86VE9 423 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 MAML2Q8IZL2 1156 aaPredicted RBP6.44□□□□□ -1.38
SPTA1-209ENST00000498708 MICAL1Q8TDZ2 1067 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 SCFD2Q8WU76 684 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 CLEC4DQ8WXI8 215 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 TBC1D5Q92609 795 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 RILPL2Q969X0 211 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 SUSD3Q96L08 255 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 NACC1Q96RE7 527 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 VAT1LQ9HCJ6 419 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 ZMIZ1Q9ULJ6 1067 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 ITPR1Q14643 2758 aa6.44□□□□□ -1.38
SPTA1-209ENST00000498708 HELZ2Q9BYK8 2649 aaKnown RBP6.44□□□□□ -1.38
SPTA1-209ENST00000498708 IGF2RP11717 2491 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 ENPP3O14638 875 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 NARSO43776 548 aaKnown RBP6.43□□□□□ -1.38
SPTA1-209ENST00000498708 ORC4O43929 436 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 DHX16O60231 1041 aaKnown RBP6.43□□□□□ -1.38
SPTA1-209ENST00000498708 DGKIO75912 1065 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 FGAP02671 866 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 DCNP07585 359 aaKnown RBP6.43□□□□□ -1.38
SPTA1-209ENST00000498708 PDHBP11177 359 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 TOP1P11387 765 aaKnown RBP6.43□□□□□ -1.38
SPTA1-209ENST00000498708 EDNRBP24530 442 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 PMLP29590 882 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 SEC13P55735 322 aa6.43□□□□□ -1.38
SPTA1-209ENST00000498708 NMIQ13287 307 aaPredicted RBP6.43□□□□□ -1.38
SPTA1-209ENST00000498708 PAN2Q504Q3 1202 aaKnown RBP6.43□□□□□ -1.38
SPTA1-209ENST00000498708 NAALADL2Q58DX5 795 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms