RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 SLC43A3Q8NBI5 491 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 CCDC124Q96CT7 223 aaKnown RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 AGXT2Q9BYV1 514 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 SLC7A5P2Q9GIP4 190 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 SEC63Q9UGP8 760 aaKnown RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 ZFP69BQ9UJL9 534 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 ATP9BO43861 1147 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 CYP4A11Q02928 519 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 PPIDQ08752 370 aaKnown RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 PEX26Q7Z412 305 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 OGFOD1Q8N543 542 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 PUS7LQ9H0K6 701 aaKnown RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
PBX1-211ENST00000498497 CROTQ9UKG9 612 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 TIMM22Q9Y584 194 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 TSPOAP1O95153 1857 aa12.47□□□□□ -0.41
PBX1-211ENST00000498497 SEMA3EO15041 775 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 MMP1P03956 469 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 CD97P48960 835 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 RALGDSQ12967 914 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 FAM117BQ6P1L5 589 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 TAOK1Q7L7X3 1001 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 THEMISQ8N1K5 641 aaPredicted RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 SPATA20Q8TB22 786 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 CADM1Q9BY67 442 aaKnown RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 TRPC7Q9HCX4 862 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 TMOD2Q9NZR1 351 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 ABCB4P21439 1286 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 FOXN2P32314 431 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 GEMIN4P57678 1058 aaKnown RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 NOP14P78316 857 aaKnown RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 DSG1Q02413 1049 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 TCIRG1Q13488 830 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 PATL1Q86TB9 770 aaKnown RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 SHKBP1Q8TBC3 707 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 HAPLN3Q96S86 360 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 LRMDAQ9H2I8 198 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 C12orf65Q9H3J6 166 aaKnown RBP12.46□□□□□ -0.41
PBX1-211ENST00000498497 NKIRAS1Q9NYS0 192 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 TRAF3IP3Q9Y228 551 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
PBX1-211ENST00000498497 ABCC1P33527 1531 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 PDS5AQ29RF7 1337 aaKnown RBP12.46□□□□□ -0.42
PBX1-211ENST00000498497 NBPF26B4DH59 902 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 T-ENOLP0DO92 83 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 PRLRP16471 622 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 NR4A1P22736 598 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 KCNJ1P48048 391 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 AUHQ13825 339 aaKnown RBP12.46□□□□□ -0.42
PBX1-211ENST00000498497 ZNF658Q5TYW1 1059 aaPredicted RBP12.46□□□□□ -0.42
PBX1-211ENST00000498497 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 PRR23CQ6ZRP0 262 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 RAPH1Q70E73 1250 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 CPNE9Q8IYJ1 553 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 PYDC1Q8WXC3 89 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 FBXO6Q9NRD1 293 aaPredicted RBP12.46□□□□□ -0.42
PBX1-211ENST00000498497 SEPT11Q9NVA2 429 aaKnown RBP12.46□□□□□ -0.42
PBX1-211ENST00000498497 ZFYVE9O95405 1425 aa12.46□□□□□ -0.42
PBX1-211ENST00000498497 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
PBX1-211ENST00000498497 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 FAM237AA0A1B0GTK4 181 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
PBX1-211ENST00000498497 TXKP42681 527 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 ARPC4P59998 168 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 NCOA4Q13772 614 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 GRAMD1BQ3KR37 738 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 ARHGAP24Q8N264 748 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.45□□□□□ -0.42
PBX1-211ENST00000498497 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
PBX1-211ENST00000498497 MYD88Q99836 296 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 PABPC3Q9H361 631 aaKnown RBP12.45□□□□□ -0.42
PBX1-211ENST00000498497 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
PBX1-211ENST00000498497 TOM1O60784 492 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 CCNB1P14635 433 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 PHEXP78562 749 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 DR1Q01658 176 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 DLG1Q12959 904 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 CARTPTQ16568 116 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 SESTD1Q86VW0 696 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 APLFQ8IW19 511 aaPredicted RBP12.45□□□□□ -0.42
PBX1-211ENST00000498497 C4orf33Q8N1A6 199 aa12.45□□□□□ -0.42
PBX1-211ENST00000498497 DQX1Q8TE96 717 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms