RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 GRB10Q13322 594 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 ITGB3BPQ13352 177 aaPredicted RBP9.06□□□□□ -0.96
PUDP-205ENST00000498474 KRT32Q14532 448 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 GRIK4Q16099 956 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 PKN1Q16512 942 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 PLEKHG4Q58EX7 1191 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 MARCH8Q5T0T0 291 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 XRRA1Q6P2D8 792 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 BLOC1S2Q6QNY1 142 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 TRMT1LQ7Z2T5 733 aaKnown RBP9.06□□□□□ -0.96
PUDP-205ENST00000498474 ALYREFQ86V81 257 aaKnown RBP9.06□□□□□ -0.96
PUDP-205ENST00000498474 DNAJB3Q8WWF6 145 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 SEPT1Q8WYJ6 367 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 GLG1Q92896 1179 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 NECAB3Q96P71 396 aaPredicted RBP9.06□□□□□ -0.96
PUDP-205ENST00000498474 C17orf80Q9BSJ5 609 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 NCOA5Q9HCD5 579 aaKnown RBP9.06□□□□□ -0.96
PUDP-205ENST00000498474 KCNH7Q9NS40 1196 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 BARHL2Q9NY43 387 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 MARK1Q9P0L2 795 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 ZNF215Q9UL58 517 aaPredicted RBP9.06□□□□□ -0.96
PUDP-205ENST00000498474 ZNF232Q9UNY5 417 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 NCOR1O75376 2440 aa9.06□□□□□ -0.96
PUDP-205ENST00000498474 ABHD14A-ACY1A0A1B0GW23 586 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 LINC01553A4QN01 128 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 FAM86B1E9PN63 330 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 EML1O00423 815 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 FAM86B2P0C5J1 330 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 GHRP10912 638 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 RPS6KB1P23443 525 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 ZNF76P36508 570 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 CHRNA4P43681 627 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 KCNQ1P51787 676 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 CLDN10P78369 228 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 PFKFB3Q16875 520 aaPredicted RBP9.05□□□□□ -0.96
PUDP-205ENST00000498474 CD163Q86VB7 1156 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 UCN2Q96RP3 112 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 RAD9AQ99638 391 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 FAM49AQ9H0Q0 323 aaPredicted RBP9.05□□□□□ -0.96
PUDP-205ENST00000498474 AGO4Q9HCK5 861 aaKnown RBP9.05□□□□□ -0.96
PUDP-205ENST00000498474 JPH1Q9HDC5 661 aaPredicted RBP9.05□□□□□ -0.96
PUDP-205ENST00000498474 AVENQ9NQS1 362 aaPredicted RBP9.05□□□□□ -0.96
PUDP-205ENST00000498474 THEGQ9P2T0 379 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 SLC9A2Q9UBY0 812 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 ATG2AQ2TAZ0 1938 aa9.05□□□□□ -0.96
PUDP-205ENST00000498474 BDP1A6H8Y1 2624 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 K7ELQ4 463 aaPredicted RBP9.04□□□□□ -0.96
PUDP-205ENST00000498474 PARNO95453 639 aaKnown RBP9.04□□□□□ -0.96
PUDP-205ENST00000498474 CCNE2O96020 404 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 GNAT1P11488 350 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 SCG2P13521 617 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 INSRRP14616 1297 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 IBSPP21815 317 aaPredicted RBP9.04□□□□□ -0.96
PUDP-205ENST00000498474 ACTR2P61160 394 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 MGAT3Q09327 533 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 STK3Q13188 491 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 TOB2Q14106 344 aaPredicted RBP9.04□□□□□ -0.96
PUDP-205ENST00000498474 PLCB4Q15147 1175 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 NTRK3Q16288 839 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 CEP55Q53EZ4 464 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 PLA2G4DQ86XP0 818 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 GIMAP8Q8ND71 665 aaPredicted RBP9.04□□□□□ -0.96
PUDP-205ENST00000498474 SEPT8Q92599 483 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 GJA10Q969M2 543 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 CDHR1Q96JP9 859 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 SLC26A6Q9BXS9 759 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 EHMT1Q9H9B1 1298 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 ERAP1Q9NZ08 941 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 VPS54Q9P1Q0 977 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 TUBE1Q9UJT0 475 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 EMSYQ7Z589 1322 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 NRCAMQ92823 1304 aa9.04□□□□□ -0.96
PUDP-205ENST00000498474 MEIS1O00470 390 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 PRPF3O43395 683 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 EDIL3O43854 480 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 CSPG5O95196 566 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 FOSP01100 380 aaPredicted RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 AMHP03971 560 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 HMGB1P09429 215 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 PDIA3P30101 505 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 SREBF1P36956 1147 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 SFSWAPQ12872 951 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 LPIN1Q14693 890 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 FAM26DQ5JW98 314 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 SYT9Q86SS6 491 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 TOP1MTQ969P6 601 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 AIFM3Q96NN9 605 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 ASB2Q96Q27 587 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 PPP1R16BQ96T49 567 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 SDF4Q9BRK5 362 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 IFIH1Q9BYX4 1025 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 AGO3Q9H9G7 860 aaKnown RBP9.03□□□□□ -0.96
PUDP-205ENST00000498474 CDY2AQ9Y6F7 541 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 TTC3P53804 2025 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms