RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SLC4A7Q9Y6M7 1214 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 SLC16A4O15374 487 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 SYN1P17600 705 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 KIZQ2M2Z5 673 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 CRYGNQ8WXF5 182 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 STAMQ92783 540 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 PAGE5Q96GU1 130 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 MSTO1Q9BUK6 570 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 BLZF1Q9H2G9 400 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 TSPY26PQ9H489 355 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 SLC38A7Q9NVC3 462 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 N4BP1O75113 896 aaKnown RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 GHRP10912 638 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 CCL23P55773 120 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 TMEM62Q0P6H9 643 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 SYCP1Q15431 976 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 NAALADL2Q58DX5 795 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 CD302Q8IX05 232 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 DHTKD1Q96HY7 919 aaPredicted RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 APOL6Q9BWW8 343 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 IFIH1Q9BYX4 1025 aaKnown RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 GREB1LQ9C091 1923 aaPredicted RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 ABHD14A-ACY1A0A1B0GW23 586 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 H0YGN5 161 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 BIN1O00499 593 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 TMEM191BP0C7N4 346 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 PPP2R3AQ06190 1150 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 LHX8Q68G74 356 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 TSHZ1Q6ZSZ6 1077 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 ELOA2Q8IYF1 753 aaPredicted RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 OSMRQ99650 979 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 C16orf70Q9BSU1 422 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 PCDH10Q9P2E7 1040 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 NUB1Q9Y5A7 615 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 A0A087WZ62 844 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 VTNP04004 478 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 YWHAEP62258 255 aaKnown RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 PAK1Q13153 545 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 BIRC3Q13489 604 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 CEP135Q66GS9 1140 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 CNKSR3Q6P9H4 555 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 SHC4Q6S5L8 630 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 ANKRD36BP1Q96IX9 119 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 YME1L1Q96TA2 773 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 FDXACB1Q9BRP7 624 aaPredicted RBP9.44□□□□□ -0.9
U2AF1-212ENST00000496462 TRPV6Q9H1D0 765 aa9.44□□□□□ -0.9
U2AF1-212ENST00000496462 EIF3DO15371 548 aaKnown RBP eCLIP9.43□□□□□ -0.9
U2AF1-212ENST00000496462 TREHO43280 583 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 COASYQ13057 564 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 KCNB1Q14721 858 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 ATF7IP2Q5U623 682 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 KIAA1841Q6NSI8 718 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 NELFCDQ8IXH7 590 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 TRAPPC12Q8WVT3 735 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 TMEM134Q9H6X4 195 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 RWDD3Q9Y3V2 267 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 ZNF233A6NK53 670 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 TRAPPC3O43617 180 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 AP3M2P53677 418 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 ZNF658Q5TYW1 1059 aaPredicted RBP9.43□□□□□ -0.9
U2AF1-212ENST00000496462 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 C4orf32Q8N8J7 132 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 BEST2Q8NFU1 509 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 ACAP3Q96P50 834 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 CTAGE1Q96RT6 745 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 REEP2Q9BRK0 252 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 TRIM9Q9C026 710 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 KATNBL1Q9H079 304 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 IGKV6D-21A0A0A0MT36 114 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 OFD1O75665 1012 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 NKX3-2P78367 333 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 SERINC5Q86VE9 423 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 RNPC3Q96LT9 517 aaKnown RBP9.43□□□□□ -0.9
U2AF1-212ENST00000496462 DHX33Q9H6R0 707 aaKnown RBP9.43□□□□□ -0.9
U2AF1-212ENST00000496462 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 TRMT13Q9NUP7 481 aaKnown RBP9.43□□□□□ -0.9
U2AF1-212ENST00000496462 KIAA1468Q9P260 1216 aa9.43□□□□□ -0.9
U2AF1-212ENST00000496462 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 PRPF6O94906 941 aaKnown RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 SERPINC1P01008 464 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 HOXD8P13378 290 aaPredicted RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 TNNI1P19237 187 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 CACNB1Q02641 598 aaPredicted RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 KRT17Q04695 432 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 RAB30Q15771 203 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 GDF6Q6KF10 455 aaPredicted RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 ANO5Q75V66 913 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 STK39Q9UEW8 545 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 HAS3O00219 553 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 ACKR2O00590 384 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 TIMP1P01033 207 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms