RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 SCP2P22307 547 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 NPTX2P47972 431 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 TNFAIP2Q03169 654 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 KCNA1Q09470 495 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 MYBPC2Q14324 1141 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 GJC2Q5T442 439 aaPredicted RBP11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 HS2ST1Q7LGA3 356 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 FRMD5Q7Z6J6 570 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 SYCP3Q8IZU3 236 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 OR6J1Q8NGC5 347 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 SLC7A3Q8WY07 619 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 BSNDQ8WZ55 320 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 KCNN1Q92952 543 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 EEF2KMTQ96G04 330 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 ZNF830Q96NB3 372 aaPredicted RBP11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 GBP3Q9H0R5 595 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 KMT5AQ9NQR1 393 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 FLRT1Q9NZU1 646 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
ECHDC3-204ENST00000495787 SIP14410 1827 aa11.77□□□□□ -0.52
ECHDC3-204ENST00000495787 VCANP13611 3396 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 CCDC169A6NNP5 214 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 CLIC2O15247 247 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 LGALS2P05162 132 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 ZNF865P0CJ78 1059 aaPredicted RBP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 XRCC5P13010 732 aaKnown RBP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 SFPQP23246 707 aaKnown RBP eCLIP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 MSNP26038 577 aaKnown RBP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 ARL2P36404 184 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 PPP2R3AQ06190 1150 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 TRIM14Q14142 442 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 PPP2R5AQ15172 486 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 CCL14Q16627 93 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 FKBP15Q5T1M5 1219 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 ARMCX5Q6P1M9 558 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 C12orf56Q8IXR9 622 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 TMEM161BQ8NDZ6 487 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 GUCD1Q96NT3 240 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 METTL14Q9HCE5 456 aaKnown RBP11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 DMAC2Q9NW81 257 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 FAM184BQ9ULE4 1060 aa11.77□□□□□ -0.53
ECHDC3-204ENST00000495787 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 PES1O00541 588 aaKnown RBP11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 NRDCO43847 1150 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 MMP3P08254 477 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 EPB41P11171 864 aaKnown RBP11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 MARK3P27448 753 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 NAMPTP43490 491 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 ZNF484Q5JVG2 852 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 PRAMEF19Q5SWL8 479 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 IER5Q5VY09 327 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 PPFIBP1Q86W92 1011 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 TRIM59Q8IWR1 403 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 ERGIC2Q96RQ1 377 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 LBHD1Q9BQE6 289 aaPredicted RBP11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 AGPAT3Q9NRZ7 376 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 GNEQ9Y223 722 aaKnown RBP11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 Q9Y3F1 56 aa11.76□□□□□ -0.53
ECHDC3-204ENST00000495787 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 ZBTB42B2RXF5 422 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 ADCY6O43306 1168 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 TPM1P09493 284 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 GLRA2P23416 452 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 CYP2C19P33261 490 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 PSMC2P35998 433 aaKnown RBP11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 LRMPQ12912 555 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 DGKDQ16760 1214 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 LRRC26Q2I0M4 334 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 MAP4K3Q8IVH8 894 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 IQCDQ96DY2 449 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 C16orf70Q9BSU1 422 aa11.75□□□□□ -0.53
ECHDC3-204ENST00000495787 NUP58Q9BVL2 599 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms