RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LIG1P18858 919 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 NPTX2P47972 431 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 CDCA2Q69YH5 1023 aaPredicted RBP21.48■■□□□ 1.03
HDAC4-212ENST00000495497 DEPTORQ8TB45 409 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 PHOSPHO2Q8TCD6 241 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 TOP1MTQ969P6 601 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 PBX4Q9BYU1 374 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 RGS18Q9NS28 235 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 KCNH3Q9ULD8 1083 aa21.48■■□□□ 1.03
HDAC4-212ENST00000495497 PIN4Q9Y237 131 aaKnown RBP21.48■■□□□ 1.03
HDAC4-212ENST00000495497 ZSCAN20P17040 1043 aaPredicted RBP21.47■■□□□ 1.03
HDAC4-212ENST00000495497 PPP2R5AQ15172 486 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 AMHR2Q16671 573 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 ZBTB8OSQ8IWT0 167 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 IQUBQ8NA54 791 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 DDX12PQ92771 950 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 CPB2Q96IY4 423 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 ZBED2Q9BTP6 218 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 NFKBIZQ9BYH8 718 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 GOLPH3LQ9H4A5 285 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 ZHX3Q9H4I2 956 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 USP20Q9Y2K6 914 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 YBX2Q9Y2T7 364 aaKnown RBP21.47■■□□□ 1.03
HDAC4-212ENST00000495497 TCHHQ07283 1943 aa21.47■■□□□ 1.03
HDAC4-212ENST00000495497 B4GALT5O43286 388 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 TSPAN1O60635 241 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 PLS3P13797 630 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 HOXA11P31270 313 aaPredicted RBP21.46■■□□□ 1.03
HDAC4-212ENST00000495497 SMAD3P84022 425 aaKnown RBP21.46■■□□□ 1.03
HDAC4-212ENST00000495497 DMP1Q13316 513 aaPredicted RBP21.46■■□□□ 1.03
HDAC4-212ENST00000495497 FSIP1Q8NA03 581 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 KMT5AQ9NQR1 393 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 SERTAD1Q9UHV2 236 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 ODF2LQ9ULJ1 636 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 HPSEQ9Y251 543 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 MICAL3Q7RTP6 2002 aa21.46■■□□□ 1.03
HDAC4-212ENST00000495497 LAMA2P24043 3122 aaKnown RBP21.46■■□□□ 1.03
HDAC4-212ENST00000495497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.45■■□□□ 1.02
HDAC4-212ENST00000495497 TTLL13PA6NNM8 815 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 C9IYK1 514 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 SLC16A4O15374 487 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 ERLIN2O94905 339 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 FAM13AO94988 1023 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 GJB5O95377 273 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 EDN1P05305 212 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 NDUFA8P51970 172 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 MYCT1Q8N699 235 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 DNAJC19Q96DA6 116 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 CCDC113Q9H0I3 377 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 C2orf40Q9H1Z8 148 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 CHST12Q9NRB3 414 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 AGPAT5Q9NUQ2 364 aa21.45■■□□□ 1.02
HDAC4-212ENST00000495497 A0A1W2PQ27 194 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 A0A1W2PQ64 194 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 A0A1W2PQD8 194 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 TLL1O43897 1013 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 TBCAO75347 108 aaKnown RBP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 SARSP49591 514 aaKnown RBP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 FXR1P51114 621 aaKnown RBP eCLIP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 TWF2Q6IBS0 349 aaKnown RBP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 SLC24A5Q71RS6 500 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 CDR2LQ86X02 465 aaPredicted RBP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 GRAMD1CQ8IYS0 662 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 MRPS27Q92552 414 aaKnown RBP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 NKX2-4Q9H2Z4 354 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 FZD8Q9H461 694 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 CUEDC2Q9H467 287 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 C1orf112Q9NSG2 853 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 PRMT7Q9NVM4 692 aaPredicted RBP21.44■■□□□ 1.02
HDAC4-212ENST00000495497 KBTBD4Q9NVX7 518 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 PTPRSQ13332 1948 aa21.44■■□□□ 1.02
HDAC4-212ENST00000495497 LCHNA4D1U4 455 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 PRKCBP05771 671 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 ARF4P18085 180 aaPredicted RBP21.43■■□□□ 1.02
HDAC4-212ENST00000495497 DNAJB2P25686 324 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 CASP1P29466 404 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 GATMP50440 423 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 ZNF131P52739 623 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 FAM189BP81408 668 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 TAS1R3Q7RTX0 852 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 CRIPAKQ8N1N5 446 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 SPIRE2Q8WWL2 714 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 C17orf75Q9HAS0 396 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 PARVGQ9HBI0 331 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 LARSQ9P2J5 1176 aaKnown RBP21.43■■□□□ 1.02
HDAC4-212ENST00000495497 ARHGAP28Q9P2N2 729 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 MSRAQ9UJ68 235 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 PCDHA11Q9Y5I1 949 aa21.43■■□□□ 1.02
HDAC4-212ENST00000495497 FAM237AA0A1B0GTK4 181 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 ACTN4O43707 911 aaKnown RBP21.42■■□□□ 1.02
HDAC4-212ENST00000495497 ARHGEF15O94989 841 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 AFMP43652 599 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 MAPK6Q16659 721 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 LONRF3Q496Y0 759 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 UBXN11Q5T124 520 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 PPP4R3CPQ6ZMV5 832 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 ECHDC2Q86YB7 292 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 NPAS4Q8IUM7 802 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 RNF169Q8NCN4 708 aa21.42■■□□□ 1.02
HDAC4-212ENST00000495497 TMEM161BQ8NDZ6 487 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms